RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 LOC285556D6RIA3 1793 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 RBBP6Q7Z6E9 1792 aaKnown RBP10.95□□□□□ -0.66
HDAC9-211ENST00000430454 SMARCA5O60264 1052 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-211ENST00000430454 GJA8P48165 433 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 GIMAP6Q6P9H5 292 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 KBTBD3Q8NAB2 608 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 SDR42E1Q8WUS8 393 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 LPAR1Q92633 364 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 NUDT12Q9BQG2 462 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 HTATIP2Q9BUP3 242 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 NACAP1Q9BZK3 213 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 HOXC10Q9NYD6 342 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 ARPP21Q9UBL0 812 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-211ENST00000430454 RABGAP1Q9Y3P9 1069 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 PDE4DIPQ5VU43 2346 aa10.95□□□□□ -0.66
HDAC9-211ENST00000430454 PTPRFP10586 1907 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 CDK5RAP2Q96SN8 1893 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 RNF113AO15541 343 aaKnown RBP10.94□□□□□ -0.66
HDAC9-211ENST00000430454 TFRCP02786 760 aaKnown RBP10.94□□□□□ -0.66
HDAC9-211ENST00000430454 HMGCRP04035 888 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 INHAP05111 366 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 SLC3A2P08195 630 aaKnown RBP10.94□□□□□ -0.66
HDAC9-211ENST00000430454 RGS2P41220 211 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 ERVK-24P63145 666 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 JAG1P78504 1218 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 GABPAQ06546 454 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
HDAC9-211ENST00000430454 C12orf60Q5U649 245 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 CATSPERGQ6ZRH7 1159 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 APPBP2Q92624 585 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 EDC3Q96F86 508 aaKnown RBP10.94□□□□□ -0.66
HDAC9-211ENST00000430454 PAGR1Q9BTK6 254 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 GABRQQ9UN88 632 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 CENPFP49454 3210 aa10.94□□□□□ -0.66
HDAC9-211ENST00000430454 MYO5AQ9Y4I1 1855 aaKnown RBP10.93□□□□□ -0.66
HDAC9-211ENST00000430454 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 USP17L21D6R901 530 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 XRCC5P13010 732 aaKnown RBP10.93□□□□□ -0.66
HDAC9-211ENST00000430454 ELNP15502 786 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 VCAM1P19320 739 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 SEPT2Q15019 361 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 MTFR1Q15390 333 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 PLEKHH3Q7Z736 793 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 MB21D1Q8N884 522 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 TANGO6Q9C0B7 1094 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 KANSL2Q9H9L4 492 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 MKNK2Q9HBH9 465 aa10.93□□□□□ -0.66
HDAC9-211ENST00000430454 HMX1Q9NP08 348 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-211ENST00000430454 MGAMO43451 1857 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 NAV1Q8NEY1 1877 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 PRKAB2O43741 272 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 SGPL1O95470 568 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 APPP05067 770 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 ZKSCAN1P17029 563 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-211ENST00000430454 MX1P20591 662 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 TDO2P48775 406 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 CDK8P49336 464 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 ICA1Q05084 483 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 COG2Q14746 738 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 LBX2Q6XYB7 198 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 C16orf86Q6ZW13 317 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 TICAM2Q86XR7 235 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 U2AF1L4Q8WU68 220 aaKnown RBP10.92□□□□□ -0.66
HDAC9-211ENST00000430454 DPF3Q92784 378 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
HDAC9-211ENST00000430454 STRBPQ96SI9 672 aaKnown RBP10.92□□□□□ -0.66
HDAC9-211ENST00000430454 FSD1Q9BTV5 496 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 UNC93B1Q9H1C4 597 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 RPAP3Q9H6T3 665 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-211ENST00000430454 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 SLC5A4Q9NY91 659 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 RBPJLQ9UBG7 517 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 NR2E3Q9Y5X4 410 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 SIPA1L1O43166 1804 aa10.92□□□□□ -0.66
HDAC9-211ENST00000430454 RPTORQ8N122 1335 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 KIAA0100Q14667 2235 aaKnown RBP10.91□□□□□ -0.66
HDAC9-211ENST00000430454 STRNO43815 780 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 FARP2O94887 1054 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-211ENST00000430454 CYP2D6P10635 497 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 SBK1Q52WX2 424 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 ANKRD45Q5TZF3 282 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 WDR78Q5VTH9 848 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 ZNF444Q8N0Y2 327 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-211ENST00000430454 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 ACER1Q8TDN7 264 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 DYNLL2Q96FJ2 89 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 DEFB118Q96PH6 123 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 PUS7LQ9H0K6 701 aaKnown RBP10.91□□□□□ -0.66
HDAC9-211ENST00000430454 RWDD1Q9H446 243 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-211ENST00000430454 GJD2Q9UKL4 321 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 TMX2Q9Y320 296 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 PCDHB15Q9Y5E8 787 aa10.91□□□□□ -0.66
HDAC9-211ENST00000430454 SLC15A5A6NIM6 579 aa10.9□□□□□ -0.66
HDAC9-211ENST00000430454 MINDY4BA8MYZ0 360 aa10.9□□□□□ -0.66
HDAC9-211ENST00000430454 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms