RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 SHROOM1Q2M3G4 852 aaPredicted RBP15.95■□□□□ 0.14
HLA-F-219ENST00000429294 MFSD14CQ5VZR4 134 aa15.95■□□□□ 0.14
HLA-F-219ENST00000429294 TATDN1Q6P1N9 297 aa15.95■□□□□ 0.14
HLA-F-219ENST00000429294 EAF2Q96CJ1 260 aaPredicted RBP15.95■□□□□ 0.14
HLA-F-219ENST00000429294 EDC3Q96F86 508 aaKnown RBP15.95■□□□□ 0.14
HLA-F-219ENST00000429294 LRCH3Q96II8 777 aa15.95■□□□□ 0.14
HLA-F-219ENST00000429294 C12orf42Q96LP6 360 aa15.95■□□□□ 0.14
HLA-F-219ENST00000429294 PORCNQ9H237 461 aa15.95■□□□□ 0.14
HLA-F-219ENST00000429294 SIPA1L1O43166 1804 aa15.95■□□□□ 0.14
HLA-F-219ENST00000429294 FOCADQ5VW36 1801 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 SOX1O00570 391 aaPredicted RBP15.94■□□□□ 0.14
HLA-F-219ENST00000429294 SYN1P17600 705 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
HLA-F-219ENST00000429294 MAP2K5Q13163 448 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 MORN1Q5T089 497 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 GPR153Q6NV75 609 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 USP6NLQ92738 828 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 CDK5RAP2Q96SN8 1893 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 ALPK3Q96L96 1907 aa15.94■□□□□ 0.14
HLA-F-219ENST00000429294 POLR3DP05423 398 aaPredicted RBP15.93■□□□□ 0.14
HLA-F-219ENST00000429294 MAGEA10P43363 369 aaPredicted RBP15.93■□□□□ 0.14
HLA-F-219ENST00000429294 TTF1Q15361 905 aaPredicted RBP15.93■□□□□ 0.14
HLA-F-219ENST00000429294 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
HLA-F-219ENST00000429294 UBE2OQ9C0C9 1292 aaKnown RBP15.93■□□□□ 0.14
HLA-F-219ENST00000429294 KIAA1683Q9H0B3 1180 aa15.93■□□□□ 0.14
HLA-F-219ENST00000429294 TLR7Q9NYK1 1049 aaKnown RBP15.93■□□□□ 0.14
HLA-F-219ENST00000429294 MYH1P12882 1939 aa15.93■□□□□ 0.14
HLA-F-219ENST00000429294 PLXNB2O15031 1838 aa15.93■□□□□ 0.14
HLA-F-219ENST00000429294 DDX60LQ5H9U9 1706 aaKnown RBP15.93■□□□□ 0.14
HLA-F-219ENST00000429294 MYO5AQ9Y4I1 1855 aaKnown RBP15.93■□□□□ 0.14
HLA-F-219ENST00000429294 SLC15A5A6NIM6 579 aa15.92■□□□□ 0.14
HLA-F-219ENST00000429294 MSCO60682 206 aa15.92■□□□□ 0.14
HLA-F-219ENST00000429294 ATP2B2Q01814 1243 aa15.92■□□□□ 0.14
HLA-F-219ENST00000429294 CCL14Q16627 93 aa15.92■□□□□ 0.14
HLA-F-219ENST00000429294 CATSPERGQ6ZRH7 1159 aa15.92■□□□□ 0.14
HLA-F-219ENST00000429294 AACSQ86V21 672 aa15.92■□□□□ 0.14
HLA-F-219ENST00000429294 TDHQ8IZJ6 230 aa15.92■□□□□ 0.14
HLA-F-219ENST00000429294 MAGEB6P1A0A0J9YX57 407 aa15.91■□□□□ 0.14
HLA-F-219ENST00000429294 VCAM1P19320 739 aa15.91■□□□□ 0.14
HLA-F-219ENST00000429294 CCND3P30281 292 aaPredicted RBP15.91■□□□□ 0.14
HLA-F-219ENST00000429294 LRIT3Q3SXY7 679 aa15.91■□□□□ 0.14
HLA-F-219ENST00000429294 LHX8Q68G74 356 aa15.91■□□□□ 0.14
HLA-F-219ENST00000429294 CRNKL1Q9BZJ0 848 aaKnown RBP15.91■□□□□ 0.14
HLA-F-219ENST00000429294 PFASO15067 1338 aa15.91■□□□□ 0.14
HLA-F-219ENST00000429294 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
HLA-F-219ENST00000429294 COL6A1P12109 1028 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 PTPREP23469 700 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 CNGA1P29973 690 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 CEP85Q6P2H3 762 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 LBX2Q6XYB7 198 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 DEFB123Q8N688 67 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 ACER1Q8TDN7 264 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
HLA-F-219ENST00000429294 ANTXR1Q9H6X2 564 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 EXOC6BQ9Y2D4 811 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 NDUFB9Q9Y6M9 179 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 COL6A3P12111 3177 aa15.9■□□□□ 0.14
HLA-F-219ENST00000429294 DLL1O00548 723 aa15.89■□□□□ 0.13
HLA-F-219ENST00000429294 PLCD1P51178 756 aa15.89■□□□□ 0.13
HLA-F-219ENST00000429294 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
HLA-F-219ENST00000429294 SLC9C2Q5TAH2 1124 aa15.89■□□□□ 0.13
HLA-F-219ENST00000429294 DPP9Q86TI2 863 aa15.89■□□□□ 0.13
HLA-F-219ENST00000429294 LBHD1Q9BQE6 289 aaPredicted RBP15.89■□□□□ 0.13
HLA-F-219ENST00000429294 MCM9Q9NXL9 1143 aa15.89■□□□□ 0.13
HLA-F-219ENST00000429294 HOXC10Q9NYD6 342 aa15.89■□□□□ 0.13
HLA-F-219ENST00000429294 CNMDO75829 334 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 HOXC6P09630 235 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 RLBP1P12271 317 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 SHMT1P34896 483 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 GRB14Q14449 540 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 COG2Q14746 738 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 POTEEQ6S8J3 1075 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 CLASRPQ8N2M8 674 aaKnown RBP15.88■□□□□ 0.13
HLA-F-219ENST00000429294 RIOK1Q9BRS2 568 aaKnown RBP15.88■□□□□ 0.13
HLA-F-219ENST00000429294 SENP6Q9GZR1 1112 aaPredicted RBP15.88■□□□□ 0.13
HLA-F-219ENST00000429294 SLC5A4Q9NY91 659 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 PRKAG2Q9UGJ0 569 aa15.88■□□□□ 0.13
HLA-F-219ENST00000429294 DDX20Q9UHI6 824 aaKnown RBP15.88■□□□□ 0.13
HLA-F-219ENST00000429294 SPDYE16A6NNV3 312 aaPredicted RBP15.87■□□□□ 0.13
HLA-F-219ENST00000429294 STRNO43815 780 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 MS4A1P11836 297 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 PDE6AP16499 860 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 SEPT2Q15019 361 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 LRRC26Q2I0M4 334 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 LPAR1Q92633 364 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 BTBD7Q9P203 1132 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 DNAH12Q6ZR08 3092 aa15.87■□□□□ 0.13
HLA-F-219ENST00000429294 HMMRO75330 724 aa15.86■□□□□ 0.13
HLA-F-219ENST00000429294 IFIT2P09913 472 aaKnown RBP15.86■□□□□ 0.13
HLA-F-219ENST00000429294 MDM2Q00987 491 aaPredicted RBP15.86■□□□□ 0.13
HLA-F-219ENST00000429294 AMOTL1Q8IY63 956 aa15.86■□□□□ 0.13
HLA-F-219ENST00000429294 ARRDC4Q8NCT1 418 aa15.86■□□□□ 0.13
HLA-F-219ENST00000429294 RHPN1Q8TCX5 695 aa15.86■□□□□ 0.13
HLA-F-219ENST00000429294 SH2D4AQ9H788 454 aa15.86■□□□□ 0.13
HLA-F-219ENST00000429294 DNM1LO00429 736 aa15.85■□□□□ 0.13
HLA-F-219ENST00000429294 CYP2C19P33261 490 aa15.85■□□□□ 0.13
HLA-F-219ENST00000429294 GABPAQ06546 454 aa15.85■□□□□ 0.13
HLA-F-219ENST00000429294 TMEM179Q6ZVK1 233 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms