RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 ASCC2Q9H1I8 757 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-216ENST00000428482 IL25Q9H293 177 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 EFCC1Q9HA90 598 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 TXNRD2Q9NNW7 524 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 PTPN22Q9Y2R2 807 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 LRRC37A2A6NM11 1700 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 DNAH12Q6ZR08 3092 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 ERC2O15083 957 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 GSPT1P15170 499 aaKnown RBP12.29□□□□□ -0.44
HDLBP-216ENST00000428482 VCAM1P19320 739 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 OSBPP22059 807 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 NUCB1Q02818 461 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 CHD1LQ86WJ1 897 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-216ENST00000428482 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 SMCR8Q8TEV9 937 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-216ENST00000428482 WDR18Q9BV38 432 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDLBP-216ENST00000428482 STAP2Q9UGK3 403 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 LCTP09848 1927 aa12.29□□□□□ -0.44
HDLBP-216ENST00000428482 KIAA0100Q14667 2235 aaKnown RBP12.28□□□□□ -0.44
HDLBP-216ENST00000428482 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 PRDM1O75626 825 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 CNMDO75829 334 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 CDK8P49336 464 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 BACE1P56817 501 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 NMIQ13287 307 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-216ENST00000428482 TMED8Q6PL24 325 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-216ENST00000428482 FASTKD5Q7L8L6 764 aaKnown RBP12.28□□□□□ -0.44
HDLBP-216ENST00000428482 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-216ENST00000428482 AS3MTQ9HBK9 375 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 ATP8A2Q9NTI2 1148 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 ARPP21Q9UBL0 812 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-216ENST00000428482 MYPNQ86TC9 1320 aa12.28□□□□□ -0.44
HDLBP-216ENST00000428482 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.44
HDLBP-216ENST00000428482 RASA1P20936 1047 aa12.27□□□□□ -0.45
HDLBP-216ENST00000428482 PSMC4P43686 418 aa12.27□□□□□ -0.45
HDLBP-216ENST00000428482 TDO2P48775 406 aa12.27□□□□□ -0.45
HDLBP-216ENST00000428482 ICA1Q05084 483 aa12.27□□□□□ -0.45
HDLBP-216ENST00000428482 ZSCAN25Q6NSZ9 544 aa12.27□□□□□ -0.45
HDLBP-216ENST00000428482 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
HDLBP-216ENST00000428482 MINDY4BA8MYZ0 360 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 USP17L10C9JJH3 530 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 HERVK_113P62684 666 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 FAM110CQ1W6H9 321 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 SIAH1Q8IUQ4 282 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 SPICE1Q8N0Z3 855 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 C12orf42Q96LP6 360 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 PAGR1Q9BTK6 254 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-216ENST00000428482 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-216ENST00000428482 INCENPQ9NQS7 918 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 SLC45A1Q9Y2W3 748 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 PLIN4Q96Q06 1357 aa12.26□□□□□ -0.45
HDLBP-216ENST00000428482 SPDYE16A6NNV3 312 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-216ENST00000428482 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 ZFYP08048 801 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-216ENST00000428482 IRX3P78415 501 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-216ENST00000428482 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 RILPL2Q969X0 211 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 ZNF333Q96JL9 665 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 NBPF3Q9H094 633 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 PORCNQ9H237 461 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 TMOD4Q9NZQ9 345 aa12.25□□□□□ -0.45
HDLBP-216ENST00000428482 FMNL1O95466 1100 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-216ENST00000428482 ELNP15502 786 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 MTFR1Q15390 333 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 USP17L2Q6R6M4 530 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 TMEM179Q6ZVK1 233 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
HDLBP-216ENST00000428482 ARMC5Q96C12 935 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 CHMP4CQ96CF2 233 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 EVI5LQ96CN4 794 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 SHISA4Q96DD7 197 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-216ENST00000428482 P2RX7Q99572 595 aaKnown RBP12.24□□□□□ -0.45
HDLBP-216ENST00000428482 KIAA1683Q9H0B3 1180 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-216ENST00000428482 SRRDQ9UH36 339 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
HDLBP-216ENST00000428482 NEDD4P46934 1319 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 CCDC171Q6TFL3 1326 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 TNPO2O14787 897 aaKnown RBP12.23□□□□□ -0.45
HDLBP-216ENST00000428482 APPP05067 770 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
HDLBP-216ENST00000428482 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-216ENST00000428482 FCGRTP55899 365 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 ATP2B2Q01814 1243 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 PPARAQ07869 468 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 TRIM32Q13049 653 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 PKN2Q16513 984 aaKnown RBP12.23□□□□□ -0.45
HDLBP-216ENST00000428482 SLC9C1Q4G0N8 1177 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms