RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 IFIT1BQ5T764 474 aaKnown RBP14.66□□□□□ -0.06
TRIM39-207ENST00000428404 APOA5Q6Q788 366 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 ZNF341Q9BYN7 854 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 GLIS2Q9BZE0 524 aaPredicted RBP14.66□□□□□ -0.06
TRIM39-207ENST00000428404 KANSL2Q9H9L4 492 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 GREB1LQ9C091 1923 aaPredicted RBP14.66□□□□□ -0.06
TRIM39-207ENST00000428404 CCDC69A6NI79 296 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 MPHOSPH10O00566 681 aaKnown RBP14.65□□□□□ -0.06
TRIM39-207ENST00000428404 CTNND1O60716 968 aaKnown RBP14.65□□□□□ -0.06
TRIM39-207ENST00000428404 USP2O75604 605 aaPredicted RBP14.65□□□□□ -0.06
TRIM39-207ENST00000428404 GDF11O95390 407 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 SLC4A3P48751 1232 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 TROAPQ12815 778 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 PPP4R3BQ5MIZ7 849 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 MKL1Q969V6 931 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 KLRG1Q96E93 195 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 CDCA5Q96FF9 252 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 TMEM47Q9BQJ4 181 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 CABP5Q9NP86 173 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 NYAP2Q9P242 653 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 SLC12A7Q9Y666 1083 aa14.65□□□□□ -0.06
TRIM39-207ENST00000428404 NID2Q14112 1375 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 TTLL1O95922 423 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 TOP1P11387 765 aaKnown RBP14.64□□□□□ -0.07
TRIM39-207ENST00000428404 SEPT2Q15019 361 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 MAP1SQ66K74 1059 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-207ENST00000428404 NFXL1Q6ZNB6 911 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 ZNF654Q8IZM8 581 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 NECAB1Q8N987 351 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 GTF3C6Q969F1 213 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 INTS4Q96HW7 963 aaKnown RBP14.64□□□□□ -0.07
TRIM39-207ENST00000428404 ZBTB21Q9ULJ3 1066 aa14.64□□□□□ -0.07
TRIM39-207ENST00000428404 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 ZBTB43O43298 467 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 DDAH1O94760 285 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 ASNSP08243 561 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 SCRN1Q12765 414 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 CATIPQ7Z7H3 387 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 CLEC10AQ8IUN9 316 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 ZNF526Q8TF50 670 aaPredicted RBP14.63□□□□□ -0.07
TRIM39-207ENST00000428404 MAP3K14Q99558 947 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 SLKQ9H2G2 1235 aaPredicted RBP14.63□□□□□ -0.07
TRIM39-207ENST00000428404 KAT14Q9H8E8 782 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
TRIM39-207ENST00000428404 CLIP2Q9UDT6 1046 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 STX8Q9UNK0 236 aa14.63□□□□□ -0.07
TRIM39-207ENST00000428404 EEF2P13639 858 aaKnown RBP14.62□□□□□ -0.07
TRIM39-207ENST00000428404 INPP5BP32019 993 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 STK3Q13188 491 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 MAP3K11Q16584 847 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 NOL9Q5SY16 702 aaKnown RBP14.62□□□□□ -0.07
TRIM39-207ENST00000428404 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 FANCBQ8NB91 859 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 PNMA1Q8ND90 353 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRIM39-207ENST00000428404 SYNPO2Q9UMS6 1093 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 MYH8P13535 1937 aa14.62□□□□□ -0.07
TRIM39-207ENST00000428404 PPP1R12BO60237 982 aaPredicted RBP14.61□□□□□ -0.07
TRIM39-207ENST00000428404 CTDNEP1O95476 244 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 ITGBL1O95965 494 aaPredicted RBP14.61□□□□□ -0.07
TRIM39-207ENST00000428404 CALM1P0DP23 149 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 CALM2P0DP24 149 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 CALM3P0DP25 149 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 ICA1Q05084 483 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 RAB3GAP1Q15042 981 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 CCDC83Q8IWF9 413 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 SCYL3Q8IZE3 742 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 CHMP4CQ96CF2 233 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 WRNIP1Q96S55 665 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 LLPHQ9BRT6 129 aaKnown RBP14.61□□□□□ -0.07
TRIM39-207ENST00000428404 MYL10Q9BUA6 226 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 NCOA5Q9HCD5 579 aaKnown RBP14.61□□□□□ -0.07
TRIM39-207ENST00000428404 FZD1Q9UP38 647 aa14.61□□□□□ -0.07
TRIM39-207ENST00000428404 A0A1W2PRG0 241 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 GOLGA8AA7E2F4 631 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 TRAF5O00463 557 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 SNHG28P0DPA3 235 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 RXRAP19793 462 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 CDC27P30260 824 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 NF2P35240 595 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
TRIM39-207ENST00000428404 METAP2P50579 478 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRIM39-207ENST00000428404 CCT2P78371 535 aaKnown RBP14.6□□□□□ -0.07
TRIM39-207ENST00000428404 MAP3K9P80192 1104 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 NTRK3Q16288 839 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-207ENST00000428404 MICU3Q86XE3 530 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 RAB11FIP4Q86YS3 637 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 ZKSCAN4Q969J2 545 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-207ENST00000428404 DAXXQ9UER7 740 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-207ENST00000428404 NAP1L2Q9ULW6 460 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-207ENST00000428404 TMX2Q9Y320 296 aa14.6□□□□□ -0.07
TRIM39-207ENST00000428404 DHX16O60231 1041 aaKnown RBP14.59□□□□□ -0.07
TRIM39-207ENST00000428404 PTPRAP18433 802 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 IREB2P48200 963 aaKnown RBP14.59□□□□□ -0.07
TRIM39-207ENST00000428404 FUT2Q10981 343 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms