RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 NAA15Q9BXJ9 866 aaKnown RBP8.97□□□□□ -0.97
LRCH3-204ENST00000428136 MRFAP1Q9Y605 127 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 TNKSO95271 1327 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 COL1A1P02452 1464 aaPredicted RBP8.97□□□□□ -0.97
LRCH3-204ENST00000428136 CALM1P0DP23 149 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 CALM2P0DP24 149 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 CALM3P0DP25 149 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 XBP1P17861 261 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 KRT2P35908 639 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 GOLGA8FQ08AF8 430 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 GOLGA8DPQ0D2H9 430 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 PAGE5Q96GU1 130 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 SAMSN1Q9NSI8 373 aaKnown RBP8.97□□□□□ -0.97
LRCH3-204ENST00000428136 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 PDS5AQ29RF7 1337 aaKnown RBP8.97□□□□□ -0.97
LRCH3-204ENST00000428136 ITIH6Q6UXX5 1313 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 MAGEB6P1A0A0J9YX57 407 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 LRRC10BA6NIK2 292 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 DDAH1O94760 285 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 CYP7A1P22680 504 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 TROAPQ12815 778 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 EARS2Q5JPH6 523 aaKnown RBP8.97□□□□□ -0.97
LRCH3-204ENST00000428136 TOGARAM2Q6ZUX3 1019 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 GRAMD1CQ8IYS0 662 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 CCDC34Q96HJ3 373 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 LRP2BPQ9P2M1 347 aa8.97□□□□□ -0.97
LRCH3-204ENST00000428136 RGL2O15211 777 aa8.96□□□□□ -0.97
LRCH3-204ENST00000428136 RRP12Q5JTH9 1297 aaKnown RBP8.96□□□□□ -0.97
LRCH3-204ENST00000428136 CMTR1Q8N1G2 835 aaKnown RBP8.96□□□□□ -0.97
LRCH3-204ENST00000428136 UBXN4Q92575 508 aa8.96□□□□□ -0.97
LRCH3-204ENST00000428136 CDCA7Q9BWT1 371 aaPredicted RBP8.96□□□□□ -0.97
LRCH3-204ENST00000428136 ADD3Q9UEY8 706 aaKnown RBP8.96□□□□□ -0.97
LRCH3-204ENST00000428136 ZHX1Q9UKY1 873 aaPredicted RBP8.96□□□□□ -0.97
LRCH3-204ENST00000428136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.96□□□□□ -0.97
LRCH3-204ENST00000428136 MYH2Q9UKX2 1941 aa8.96□□□□□ -0.97
LRCH3-204ENST00000428136 CASZ1Q86V15 1759 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 COL5A3P25940 1745 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 AKR1B15C9JRZ8 316 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 ORC4O43929 436 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 PNMA6AP0CW24 399 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 CD44P16070 742 aaKnown RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 CDK11BP21127 795 aaKnown RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 CASQ1P31415 396 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 CRKLP46109 303 aaKnown RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 ATP2C1P98194 919 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 UBE4AQ14139 1066 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 E2F4Q16254 413 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 GPR161Q8N6U8 529 aaKnown RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 MIGA1Q8NAN2 632 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 CTAGE1Q96RT6 745 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 WDR24Q96S15 920 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 MYH14Q7Z406 1995 aaKnown RBP8.96□□□□□ -0.98
LRCH3-204ENST00000428136 LAMB1P07942 1786 aa8.96□□□□□ -0.98
LRCH3-204ENST00000428136 URI1O94763 535 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 PLA2G4AP47712 749 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 TRAPPC10P48553 1259 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 ADKP55263 362 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 SF3B3Q15393 1217 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 ZNF827Q17R98 1081 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 CCDC51Q96ER9 411 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 CARD6Q9BX69 1037 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 ARGLU1Q9NWB6 273 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 ZNF335Q9H4Z2 1342 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 TMTC3Q6ZXV5 915 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 CATIPQ7Z7H3 387 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 TRMT44Q8IYL2 757 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 ZNF384Q8TF68 577 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 NUP133Q8WUM0 1156 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 SDR42E1Q8WUS8 393 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 EPSTI1Q96J88 318 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 PYM1Q9BRP8 204 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 VPS54Q9P1Q0 977 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 KIAA1551Q9HCM1 1747 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 FAM205CA6NFA0 338 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 NT5C2P49902 561 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 AKAP17AQ02040 695 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 PTPN21Q16825 1174 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 CLEC4GQ6UXB4 293 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 RASGRP2Q7LDG7 609 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 MNS1Q8NEH6 495 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 GNL3LQ9NVN8 582 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 BSDC1Q9NW68 430 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 LIMA1Q9UHB6 759 aaKnown RBP8.95□□□□□ -0.98
LRCH3-204ENST00000428136 ADGRG1Q9Y653 693 aa8.95□□□□□ -0.98
LRCH3-204ENST00000428136 CNTNAP5Q8WYK1 1306 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 TEX33O43247 280 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 GNG11P61952 73 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 TUBB2AQ13885 445 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 CTR9Q6PD62 1173 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 CCDC82Q8N4S0 544 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 RABGGTAQ92696 567 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 DHX58Q96C10 678 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 TUBB2BQ9BVA1 445 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 V9GY48 417 aaPredicted RBP8.94□□□□□ -0.98
LRCH3-204ENST00000428136 NRAPQ86VF7 1730 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 SYNRGQ9UMZ2 1314 aa8.94□□□□□ -0.98
LRCH3-204ENST00000428136 MAST2Q6P0Q8 1798 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms