RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DGKZQ13574 1117 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 KIF22Q14807 665 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 ALX1Q15699 326 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 ABCB5Q2M3G0 1257 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 EXOC6Q8TAG9 804 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 LPAR1Q92633 364 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 OSBP2Q969R2 916 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 SH2D4AQ9H788 454 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 GPAA1O43292 621 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 RRP1BQ14684 758 aaKnown RBP10.94□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 OTOP1Q7RTM1 612 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 ARMC5Q96C12 935 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 EFCC1Q9HA90 598 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 TMOD4Q9NZQ9 345 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 MORF4L1Q9UBU8 362 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 TSKSQ9UJT2 592 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 ANAPC4Q9UJX5 808 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 PCDHB8Q9UN66 801 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 SLC4A4Q9Y6R1 1079 aa10.94□□□□□ -0.66
SMC1A-203ENST00000428014 PLIN4Q96Q06 1357 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L21D6R901 530 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 IGHDP01880 384 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 FGRP09769 529 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 OSBPP22059 807 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 CTR9Q6PD62 1173 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 R3HDMLQ9H3Y0 253 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 KANSL2Q9H9L4 492 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 PTPN22Q9Y2R2 807 aa10.93□□□□□ -0.66
SMC1A-203ENST00000428014 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
SMC1A-203ENST00000428014 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
SMC1A-203ENST00000428014 GH2P01242 217 aa10.92□□□□□ -0.66
SMC1A-203ENST00000428014 SLC3A2P08195 630 aaKnown RBP10.92□□□□□ -0.66
SMC1A-203ENST00000428014 IRF5Q13568 498 aa10.92□□□□□ -0.66
SMC1A-203ENST00000428014 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
SMC1A-203ENST00000428014 OTUD7AQ8TE49 926 aaPredicted RBP10.92□□□□□ -0.66
SMC1A-203ENST00000428014 SAP30BPQ9UHR5 308 aaKnown RBP10.92□□□□□ -0.66
SMC1A-203ENST00000428014 TMX2Q9Y320 296 aa10.92□□□□□ -0.66
SMC1A-203ENST00000428014 FAM196BA6NMK8 535 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L15C9J2P7 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L13C9JLJ4 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L11C9JVI0 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L18D6R9N7 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L22D6RA61 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L17D6RBQ6 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L19D6RCP7 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L20D6RJB6 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 GUCY1A2P33402 732 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 CDK8P49336 464 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 HMGCS2P54868 508 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 FCGRTP55899 365 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 USP17L24Q0WX57 530 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 MTMR2Q13614 643 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 MCMDC2Q4G0Z9 681 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 ERICH6BQ5W0A0 696 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 NBPF11Q86T75 865 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 IFNL3Q8IZI9 196 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 MB21D1Q8N884 522 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 PXYLP1Q8TE99 480 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 SMCR8Q8TEV9 937 aaPredicted RBP10.91□□□□□ -0.66
SMC1A-203ENST00000428014 MKL1Q969V6 931 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 LNPKQ9C0E8 428 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 NYAP2Q9P242 653 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 HPS5Q9UPZ3 1129 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 MYH8P13535 1937 aa10.91□□□□□ -0.66
SMC1A-203ENST00000428014 BAZ2AQ9UIF9 1905 aaKnown RBP10.91□□□□□ -0.66
SMC1A-203ENST00000428014 RAD50Q92878 1312 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 PRKAB2O43741 272 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 NOVP48745 357 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 JAG1P78504 1218 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 PDE4BQ07343 736 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 GADL1Q6ZQY3 521 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 ASCC2Q9H1I8 757 aaPredicted RBP10.9□□□□□ -0.66
SMC1A-203ENST00000428014 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 HOXC10Q9NYD6 342 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 SRRDQ9UH36 339 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 RABGAP1Q9Y3P9 1069 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 TRIM17Q9Y577 477 aa10.9□□□□□ -0.66
SMC1A-203ENST00000428014 RBBP6Q7Z6E9 1792 aaKnown RBP10.9□□□□□ -0.67
SMC1A-203ENST00000428014 KIAA0100Q14667 2235 aaKnown RBP10.89□□□□□ -0.67
SMC1A-203ENST00000428014 WDR46O15213 610 aaKnown RBP10.89□□□□□ -0.67
SMC1A-203ENST00000428014 ORC4O43929 436 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 GDF11O95390 407 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 FDX1P10109 184 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 XRCC5P13010 732 aaKnown RBP10.89□□□□□ -0.67
SMC1A-203ENST00000428014 TDO2P48775 406 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 IRX3P78415 501 aaPredicted RBP10.89□□□□□ -0.67
SMC1A-203ENST00000428014 TSHZ3Q63HK5 1081 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
SMC1A-203ENST00000428014 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 NAPBQ9H115 298 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 VCPKMTQ9H867 229 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms