RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 SURF6O75683 361 aaKnown RBP20.67■□□□□ 0.9
PSMD4-203ENST00000427779 USP5P45974 858 aa20.67■□□□□ 0.9
PSMD4-203ENST00000427779 DYNLL1P63167 89 aaKnown RBP20.67■□□□□ 0.9
PSMD4-203ENST00000427779 MFSD14CQ5VZR4 134 aa20.67■□□□□ 0.9
PSMD4-203ENST00000427779 TATDN1Q6P1N9 297 aa20.67■□□□□ 0.9
PSMD4-203ENST00000427779 Q7L0L9 218 aa20.67■□□□□ 0.9
PSMD4-203ENST00000427779 EDC3Q96F86 508 aaKnown RBP20.67■□□□□ 0.9
PSMD4-203ENST00000427779 EHD4Q9H223 541 aa20.67■□□□□ 0.9
PSMD4-203ENST00000427779 PIH1D3Q9NQM4 214 aaKnown RBP20.67■□□□□ 0.9
PSMD4-203ENST00000427779 SERPINB13Q9UIV8 391 aa20.67■□□□□ 0.9
PSMD4-203ENST00000427779 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
PSMD4-203ENST00000427779 MSCO60682 206 aa20.66■□□□□ 0.9
PSMD4-203ENST00000427779 BCAR3O75815 825 aa20.66■□□□□ 0.9
PSMD4-203ENST00000427779 IDH1O75874 414 aaKnown RBP20.66■□□□□ 0.9
PSMD4-203ENST00000427779 ATP8B2P98198 1209 aa20.66■□□□□ 0.9
PSMD4-203ENST00000427779 ZYXQ15942 572 aaKnown RBP20.66■□□□□ 0.9
PSMD4-203ENST00000427779 LRRC26Q2I0M4 334 aa20.66■□□□□ 0.9
PSMD4-203ENST00000427779 WDR78Q5VTH9 848 aa20.66■□□□□ 0.9
PSMD4-203ENST00000427779 TMED8Q6PL24 325 aaPredicted RBP20.66■□□□□ 0.9
PSMD4-203ENST00000427779 SLC15A5A6NIM6 579 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 RAB3GAP1Q15042 981 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 ZKSCAN2Q63HK3 967 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 POTEEQ6S8J3 1075 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 CATSPERGQ6ZRH7 1159 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 TTC6Q86TZ1 520 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 KIAA1683Q9H0B3 1180 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 CABP5Q9NP86 173 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 MTMR10Q9NXD2 777 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 DBNLQ9UJU6 430 aaKnown RBP20.65■□□□□ 0.9
PSMD4-203ENST00000427779 IVNS1ABPQ9Y6Y0 642 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 A0A0C4DFX4 3053 aa20.65■□□□□ 0.9
PSMD4-203ENST00000427779 CERKLQ49MI3 558 aaPredicted RBP20.64■□□□□ 0.89
PSMD4-203ENST00000427779 LBX2Q6XYB7 198 aa20.64■□□□□ 0.89
PSMD4-203ENST00000427779 MIGA1Q8NAN2 632 aa20.64■□□□□ 0.89
PSMD4-203ENST00000427779 CNMDO75829 334 aa20.63■□□□□ 0.89
PSMD4-203ENST00000427779 VCAM1P19320 739 aa20.63■□□□□ 0.89
PSMD4-203ENST00000427779 PTPREP23469 700 aa20.63■□□□□ 0.89
PSMD4-203ENST00000427779 MDM2Q00987 491 aaPredicted RBP20.63■□□□□ 0.89
PSMD4-203ENST00000427779 ATP2B2Q01814 1243 aa20.63■□□□□ 0.89
PSMD4-203ENST00000427779 ABCB5Q2M3G0 1257 aa20.63■□□□□ 0.89
PSMD4-203ENST00000427779 MAGEB6Q8N7X4 407 aa20.63■□□□□ 0.89
PSMD4-203ENST00000427779 LBHD1Q9BQE6 289 aaPredicted RBP20.63■□□□□ 0.89
PSMD4-203ENST00000427779 DDX20Q9UHI6 824 aaKnown RBP20.63■□□□□ 0.89
PSMD4-203ENST00000427779 NOP58Q9Y2X3 529 aaKnown RBP20.63■□□□□ 0.89
PSMD4-203ENST00000427779 HOXC6P09630 235 aa20.62■□□□□ 0.89
PSMD4-203ENST00000427779 MAP3K12Q12852 859 aa20.62■□□□□ 0.89
PSMD4-203ENST00000427779 LPAR1Q92633 364 aa20.62■□□□□ 0.89
PSMD4-203ENST00000427779 SENP6Q9GZR1 1112 aaPredicted RBP20.62■□□□□ 0.89
PSMD4-203ENST00000427779 CCDC8Q9H0W5 538 aaPredicted RBP20.62■□□□□ 0.89
PSMD4-203ENST00000427779 NAV1Q8NEY1 1877 aa20.62■□□□□ 0.89
PSMD4-203ENST00000427779 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
PSMD4-203ENST00000427779 CNGA1P29973 690 aa20.61■□□□□ 0.89
PSMD4-203ENST00000427779 GRB14Q14449 540 aa20.61■□□□□ 0.89
PSMD4-203ENST00000427779 TLR7Q9NYK1 1049 aaKnown RBP20.61■□□□□ 0.89
PSMD4-203ENST00000427779 FLRT1Q9NZU1 646 aa20.61■□□□□ 0.89
PSMD4-203ENST00000427779 PRKAG2Q9UGJ0 569 aa20.61■□□□□ 0.89
PSMD4-203ENST00000427779 NDUFB9Q9Y6M9 179 aa20.61■□□□□ 0.89
PSMD4-203ENST00000427779 ZNF236Q9UL36 1845 aa20.6■□□□□ 0.89
PSMD4-203ENST00000427779 DNM1LO00429 736 aa20.6■□□□□ 0.89
PSMD4-203ENST00000427779 EAF2Q96CJ1 260 aaPredicted RBP20.6■□□□□ 0.89
PSMD4-203ENST00000427779 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
PSMD4-203ENST00000427779 C1orf115Q9H7X2 142 aa20.6■□□□□ 0.89
PSMD4-203ENST00000427779 BTBD7Q9P203 1132 aa20.6■□□□□ 0.89
PSMD4-203ENST00000427779 SPDYE16A6NNV3 312 aaPredicted RBP20.59■□□□□ 0.89
PSMD4-203ENST00000427779 FAM109BQ6ICB4 259 aaPredicted RBP20.59■□□□□ 0.89
PSMD4-203ENST00000427779 FTSJ3Q8IY81 847 aaKnown RBP20.59■□□□□ 0.89
PSMD4-203ENST00000427779 ACER1Q8TDN7 264 aa20.59■□□□□ 0.89
PSMD4-203ENST00000427779 SHMT1P34896 483 aa20.58■□□□□ 0.89
PSMD4-203ENST00000427779 DNAH12Q6ZR08 3092 aa20.57■□□□□ 0.88
PSMD4-203ENST00000427779 MYH8P13535 1937 aa20.57■□□□□ 0.88
PSMD4-203ENST00000427779 RLFQ13129 1914 aa20.57■□□□□ 0.88
PSMD4-203ENST00000427779 POLR3DP05423 398 aaPredicted RBP20.57■□□□□ 0.88
PSMD4-203ENST00000427779 CYP2C19P33261 490 aa20.57■□□□□ 0.88
PSMD4-203ENST00000427779 ATN1P54259 1190 aaPredicted RBP20.57■□□□□ 0.88
PSMD4-203ENST00000427779 DPP9Q86TI2 863 aa20.57■□□□□ 0.88
PSMD4-203ENST00000427779 NPLOC4Q8TAT6 608 aa20.57■□□□□ 0.88
PSMD4-203ENST00000427779 LTBP2Q14767 1821 aa20.57■□□□□ 0.88
PSMD4-203ENST00000427779 STRNO43815 780 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 CYBAP13498 195 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 PLCD1P51178 756 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 COG2Q14746 738 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 ERC1Q8IUD2 1116 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 ITPRIPQ8IWB1 547 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 ARRDC4Q8NCT1 418 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 ANTXR1Q9H6X2 564 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 HOXC10Q9NYD6 342 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 A0A0G2JMZ2 1700 aa20.56■□□□□ 0.88
PSMD4-203ENST00000427779 MAGEB6P1A0A0J9YX57 407 aa20.55■□□□□ 0.88
PSMD4-203ENST00000427779 POTEB2H3BUK9 544 aa20.55■□□□□ 0.88
PSMD4-203ENST00000427779 RTP1P59025 263 aa20.55■□□□□ 0.88
PSMD4-203ENST00000427779 SEPT2Q15019 361 aa20.55■□□□□ 0.88
PSMD4-203ENST00000427779 TTF1Q15361 905 aaPredicted RBP20.55■□□□□ 0.88
PSMD4-203ENST00000427779 OLFML2BQ68BL8 750 aa20.55■□□□□ 0.88
PSMD4-203ENST00000427779 RIOK1Q9BRS2 568 aaKnown RBP20.55■□□□□ 0.88
PSMD4-203ENST00000427779 CRNKL1Q9BZJ0 848 aaKnown RBP20.55■□□□□ 0.88
PSMD4-203ENST00000427779 SLC5A4Q9NY91 659 aa20.55■□□□□ 0.88
PSMD4-203ENST00000427779 KBTBD13C9JR72 458 aa20.54■□□□□ 0.88
PSMD4-203ENST00000427779 MPHOSPH10O00566 681 aaKnown RBP20.54■□□□□ 0.88
PSMD4-203ENST00000427779 ADORA2AP29274 412 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms