RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 SOCS4Q8WXH5 440 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 EDC3Q96F86 508 aaKnown RBP15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 PAWRQ96IZ0 340 aaKnown RBP15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 NUDT12Q9BQG2 462 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 KIAA1683Q9H0B3 1180 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 NR2E3Q9Y5X4 410 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 ZNF532Q9HCE3 1301 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 MYO5AQ9Y4I1 1855 aaKnown RBP15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 GOLIM4O00461 696 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 HMMRO75330 724 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 VCAM1P19320 739 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 MORN1Q5T089 497 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 GPR142Q7Z601 462 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 DNAJC2Q99543 621 aaKnown RBP15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 FEZ1Q99689 392 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 PAGR1Q9BTK6 254 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 HMX1Q9NP08 348 aaPredicted RBP15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 CDK5RAP2Q96SN8 1893 aa15.84■□□□□ 0.13
DEPDC7-203ENST00000427755 USP17L15C9J2P7 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L13C9JLJ4 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L11C9JVI0 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L18D6R9N7 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L22D6RA61 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L17D6RBQ6 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L19D6RCP7 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L20D6RJB6 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 RAB11FIP3O75154 756 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 POLR3DP05423 398 aaPredicted RBP15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 IFIT2P09913 472 aaKnown RBP15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP14P54578 494 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 USP17L24Q0WX57 530 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 CATSPERGQ6ZRH7 1159 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 LCORLQ8N3X6 602 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 ANKLE1Q8NAG6 615 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 CRNKL1Q9BZJ0 848 aaKnown RBP15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 DCP1AQ9NPI6 582 aaPredicted RBP15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.12
DEPDC7-203ENST00000427755 CEP290O15078 2479 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 EVI5O60447 810 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 PRKAR2AP13861 404 aaKnown RBP15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 SEPT2Q15019 361 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 SLFNL1Q499Z3 407 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 LBX2Q6XYB7 198 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 NECAB2Q7Z6G3 386 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 PLEKHH3Q7Z736 793 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 SDR42E1Q8WUS8 393 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 CABP5Q9NP86 173 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 MCM9Q9NXL9 1143 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
DEPDC7-203ENST00000427755 A0A1W2PRG0 241 aa15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 CYP2D6P10635 497 aa15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 RGS2P41220 211 aa15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 CACNB2Q08289 660 aaPredicted RBP15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 CCL14Q16627 93 aa15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 TRMT44Q8IYL2 757 aaKnown RBP15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 BOLA2Q9H3K6 86 aa15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 RCAN3Q9UKA8 241 aa15.81■□□□□ 0.12
DEPDC7-203ENST00000427755 PLXNB2O15031 1838 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 DDX60LQ5H9U9 1706 aaKnown RBP15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 SPDYE16A6NNV3 312 aaPredicted RBP15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 CHGBP05060 677 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 ZKSCAN1P17029 563 aaPredicted RBP15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 ATP5JP18859 108 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 ADD2P35612 726 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 SLC44A5Q8NCS7 719 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 APBA2Q99767 749 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 HAUS7Q99871 368 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 RPAP3Q9H6T3 665 aaPredicted RBP15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 PAG1Q9NWQ8 432 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 BTBD7Q9P203 1132 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 TRIOBPQ9H2D6 2365 aa15.8■□□□□ 0.12
DEPDC7-203ENST00000427755 PRKAB2O43741 272 aa15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 CCNA1P78396 465 aa15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 MAP2K5Q13163 448 aa15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 C20orf194Q5TEA3 1177 aa15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 NBPF3Q9H094 633 aa15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 RANBP2P49792 3224 aaKnown RBP15.79■□□□□ 0.12
DEPDC7-203ENST00000427755 SMIM22K7EJ46 135 aa15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 MBD4O95243 580 aa15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 CCND3P30281 292 aaPredicted RBP15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 KIAA1755Q5JYT7 1200 aa15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 LHX8Q68G74 356 aa15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 SIAH1Q8IUQ4 282 aa15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 DYNLL2Q96FJ2 89 aa15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 CHMP4BQ9H444 224 aaKnown RBP15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 C11orf49Q9H6J7 331 aa15.78■□□□□ 0.12
DEPDC7-203ENST00000427755 PFASO15067 1338 aa15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 SLC15A5A6NIM6 579 aa15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 MPHOSPH10O00566 681 aaKnown RBP15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 IGHA2P01877 340 aa15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 PTPREP23469 700 aa15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 GRB14Q14449 540 aa15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 TMEM179Q6ZVK1 233 aa15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.12
DEPDC7-203ENST00000427755 FLRT1Q9NZU1 646 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms