RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 PNMA8AQ86V59 439 aaPredicted RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 NDUFAF2Q8N183 169 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 TRIML1Q8N9V2 468 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 COA7Q96BR5 231 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 SBNO2Q9Y2G9 1366 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 TOPBP1Q92547 1522 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 CFBP00751 764 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 CD19P15391 556 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 HSPA1LP34931 641 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 PLCD1P51178 756 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 CALCOCO2Q13137 446 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 IDI1Q13907 227 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 RNF219Q5W0B1 726 aaPredicted RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 CASC4Q6P4E1 433 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 SMAP1Q8IYB5 467 aaPredicted RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 TTC30BQ8N4P2 665 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 ANKS4BQ8N8V4 417 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.35□□□□□ -1.39
HERC4-206ENST00000427635 ARPP19P56211 112 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 POM121Q96HA1 1249 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 CPSF3Q9UKF6 684 aaKnown RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 DNM3Q9UQ16 869 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 MYL3P08590 195 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 FAM102BQ5T8I3 360 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 UBE2Q1Q7Z7E8 422 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 MYCT1Q8N699 235 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 HAUS8Q9BT25 410 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 AKT3Q9Y243 479 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 NOS1P29475 1434 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 FOSP01100 380 aaPredicted RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 KRT3P12035 628 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 DIXDC1Q155Q3 683 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 LGSNQ5TDP6 509 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 PDCL2Q8N4E4 241 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 SYNDIG1Q9H7V2 258 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 UBN1Q9NPG3 1134 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 ZNF215Q9UL58 517 aaPredicted RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 ATF5Q9Y2D1 282 aaPredicted RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 KIAA0586Q9BVV6 1533 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 SMAPO00193 183 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 NBPF10Q6P3W6 841 aaKnown RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 CNNM4Q6P4Q7 775 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 CCDC25Q86WR0 208 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 UBL4BQ8N7F7 174 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 CDCA7LQ96GN5 454 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 IWS1Q96ST2 819 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 MMTAG2Q9BU76 263 aaKnown RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 SLITRK6Q9H5Y7 841 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 SEPT10Q9P0V9 454 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 PARP2Q9UGN5 583 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 MOSPD1Q9UJG1 213 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 SRGAP2BP0DMP2 458 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 ALAS1P13196 640 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 NME8Q8N427 588 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 KCNK9Q9NPC2 374 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 SH3TC1Q8TE82 1336 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 ZNF233A6NK53 670 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 PPEF1O14829 653 aaPredicted RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 TNNI1P19237 187 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 LIG4P49917 911 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 UBXN1Q04323 297 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 GOLGA8FQ08AF8 430 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 GOLGA8DPQ0D2H9 430 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 LRCH2Q5VUJ6 765 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 KRT27Q7Z3Y8 459 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 JPH2Q9BR39 696 aaPredicted RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 APOL6Q9BWW8 343 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 ADD3Q9UEY8 706 aaKnown RBP6.34□□□□□ -1.39
HERC4-206ENST00000427635 POLIQ9UNA4 740 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 ANKRD36BQ8N2N9 1353 aa6.34□□□□□ -1.39
HERC4-206ENST00000427635 WDR64B1ANS9 1081 aa6.34□□□□□ -1.4
HERC4-206ENST00000427635 ITGA6P23229 1130 aa6.34□□□□□ -1.4
HERC4-206ENST00000427635 ASIC2Q16515 512 aa6.34□□□□□ -1.4
HERC4-206ENST00000427635 ACBD5Q5T8D3 534 aaPredicted RBP6.34□□□□□ -1.4
HERC4-206ENST00000427635 URGCPQ8TCY9 931 aa6.34□□□□□ -1.4
HERC4-206ENST00000427635 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.34□□□□□ -1.4
HERC4-206ENST00000427635 SRPK1Q96SB4 655 aaKnown RBP6.34□□□□□ -1.4
HERC4-206ENST00000427635 HESX1Q9UBX0 185 aa6.34□□□□□ -1.4
HERC4-206ENST00000427635 POLR2MP0CAP2 368 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 RPS6KA2Q15349 733 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 FYB2Q5VWT5 728 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 C11orf96Q7Z7L8 435 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 HAUS1Q96CS2 278 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 PPCSQ9HAB8 311 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 PRDM5Q9NQX1 630 aaPredicted RBP6.33□□□□□ -1.4
HERC4-206ENST00000427635 ANGPTL3Q9Y5C1 460 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 SORBS3O60504 671 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 STAM2O75886 525 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 MBD4O95243 580 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 PARNO95453 639 aaKnown RBP6.33□□□□□ -1.4
HERC4-206ENST00000427635 GNAT1P11488 350 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 PRIM1P49642 420 aaKnown RBP6.33□□□□□ -1.4
HERC4-206ENST00000427635 UBASH3AP57075 661 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 RHBDL3P58872 404 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 PSMC1P62191 440 aaKnown RBP6.33□□□□□ -1.4
HERC4-206ENST00000427635 Q6ZUG5 572 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 UIMC1Q96RL1 719 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 YEATS2Q9ULM3 1422 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms