RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PHF20Q9BVI0 1012 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 MKNK2Q9HBH9 465 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 SAP30BPQ9UHR5 308 aaKnown RBP16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 FAM237AA0A1B0GTK4 181 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 RCSD1Q6JBY9 416 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 DHX40Q8IX18 779 aaKnown RBP16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 NAT10Q9H0A0 1025 aaKnown RBP16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 KAT14Q9H8E8 782 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 DDX60LQ5H9U9 1706 aaKnown RBP16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 NRXN2Q9P2S2 1712 aa16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 TPM3P06753 285 aa16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 NT5C2P49902 561 aa16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 TEX11Q8IYF3 940 aa16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 TBC1D22AQ8WUA7 517 aa16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 PCDHB6Q9Y5E3 794 aa16.1■□□□□ 0.17
APOBEC3D-202ENST00000427494 GPR75-ASB3A0A0A6YYF3 556 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 OFD1O75665 1012 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 ATP2B1P20020 1258 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 KIF5BP33176 963 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 RBM6P78332 1123 aaKnown RBP16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 COL23A1Q86Y22 540 aaPredicted RBP16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 DRC7Q8IY82 874 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 NLGN1Q8N2Q7 840 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 BRMS1Q9HCU9 246 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 IL17RBQ9NRM6 502 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 BIN1O00499 593 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 APBA3O96018 575 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 TSPY3P0CV98 308 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 TSPY8P0CW00 308 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 PLCG2P16885 1265 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 PLCD1P51178 756 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 SLF2Q8IX21 1173 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 SLC44A5Q8NCS7 719 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
APOBEC3D-202ENST00000427494 MYH1P12882 1939 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 RIMBP2O15034 1052 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 PLSCR1O15162 318 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 NLRP12P59046 1061 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 DPCR1Q3MIW9 517 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.16
APOBEC3D-202ENST00000427494 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 SCG2P13521 617 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 PTPREP23469 700 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 SPECC1Q5M775 1068 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 SARM1Q6SZW1 724 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 FLT1P17948 1338 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 FAM205AQ6ZU69 1335 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 FOCADQ5VW36 1801 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 SRGNP10124 158 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 NPR1P16066 1061 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 GTF2IP78347 998 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 GRIN1Q05586 938 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 EARS2Q5JPH6 523 aaKnown RBP16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 ZNF772Q68DY9 489 aaPredicted RBP16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 ANKS1AQ92625 1134 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 FAM163AQ96GL9 167 aaPredicted RBP16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 FAM13BQ9NYF5 915 aa16.07■□□□□ 0.16
APOBEC3D-202ENST00000427494 GAKO14976 1311 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 PNOCQ13519 176 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 CNNM3Q8NE01 707 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 BPIFA3Q9BQP9 254 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 KCNF1Q9H3M0 494 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 SRPRBQ9Y5M8 271 aaKnown RBP16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 RASA1P20936 1047 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 PTGS1P23219 599 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 CDC25BP30305 580 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 RHBDL3P58872 404 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 NLRP5P59047 1200 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 GRM4Q14833 912 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 NPY5RQ15761 445 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 PFKFB3Q16875 520 aaPredicted RBP16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 LONRF3Q496Y0 759 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 PARP3Q9Y6F1 533 aa16.06■□□□□ 0.16
APOBEC3D-202ENST00000427494 SNED1Q8TER0 1413 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 BAZ2BQ9UIF8 2168 aaKnown RBP16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 MMP10P09238 476 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms