RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CRHR2Q13324 411 aa29.91■■■□□ 2.38
HERPUD2-205ENST00000427455 LAMA4Q16363 1823 aa29.91■■■□□ 2.38
HERPUD2-205ENST00000427455 PDHXO00330 501 aa29.9■■■□□ 2.38
HERPUD2-205ENST00000427455 NOM1Q5C9Z4 860 aaKnown RBP29.9■■■□□ 2.38
HERPUD2-205ENST00000427455 FEZ1Q99689 392 aa29.9■■■□□ 2.38
HERPUD2-205ENST00000427455 ZFYVE28Q9HCC9 887 aa29.9■■■□□ 2.38
HERPUD2-205ENST00000427455 AGTPBP1Q9UPW5 1226 aa29.9■■■□□ 2.38
HERPUD2-205ENST00000427455 SLC45A1Q9Y2W3 748 aa29.9■■■□□ 2.38
HERPUD2-205ENST00000427455 SGSM2O43147 1006 aa29.89■■■□□ 2.38
HERPUD2-205ENST00000427455 PRDM1O75626 825 aa29.89■■■□□ 2.38
HERPUD2-205ENST00000427455 TMOD4Q9NZQ9 345 aa29.89■■■□□ 2.38
HERPUD2-205ENST00000427455 ICA1Q05084 483 aa29.88■■■□□ 2.37
HERPUD2-205ENST00000427455 CTDSPL2Q05D32 466 aa29.88■■■□□ 2.37
HERPUD2-205ENST00000427455 ZNF444Q8N0Y2 327 aaPredicted RBP29.88■■■□□ 2.37
HERPUD2-205ENST00000427455 KIAA1683Q9H0B3 1180 aa29.88■■■□□ 2.37
HERPUD2-205ENST00000427455 R3HDMLQ9H3Y0 253 aa29.88■■■□□ 2.37
HERPUD2-205ENST00000427455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.88■■■□□ 2.37
HERPUD2-205ENST00000427455 USP14P54578 494 aa29.87■■■□□ 2.37
HERPUD2-205ENST00000427455 DGKZQ13574 1117 aa29.87■■■□□ 2.37
HERPUD2-205ENST00000427455 TREML2Q5T2D2 321 aa29.87■■■□□ 2.37
HERPUD2-205ENST00000427455 ACER1Q8TDN7 264 aa29.87■■■□□ 2.37
HERPUD2-205ENST00000427455 PARK7Q99497 189 aaKnown RBP29.87■■■□□ 2.37
HERPUD2-205ENST00000427455 GPR25O00155 361 aa29.86■■■□□ 2.37
HERPUD2-205ENST00000427455 USP17L2Q6R6M4 530 aa29.86■■■□□ 2.37
HERPUD2-205ENST00000427455 KANSL2Q9H9L4 492 aa29.86■■■□□ 2.37
HERPUD2-205ENST00000427455 ARHGEF10LQ9HCE6 1279 aa29.86■■■□□ 2.37
HERPUD2-205ENST00000427455 PLIN4Q96Q06 1357 aa29.86■■■□□ 2.37
HERPUD2-205ENST00000427455 PABPC4Q13310 644 aaKnown RBP eCLIP29.85■■■□□ 2.37
HERPUD2-205ENST00000427455 CLEC10AQ8IUN9 316 aa29.85■■■□□ 2.37
HERPUD2-205ENST00000427455 C12orf42Q96LP6 360 aa29.85■■■□□ 2.37
HERPUD2-205ENST00000427455 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.85■■■□□ 2.37
HERPUD2-205ENST00000427455 CTNNA3Q9UI47 895 aa29.85■■■□□ 2.37
HERPUD2-205ENST00000427455 HAND2P61296 217 aa29.84■■■□□ 2.37
HERPUD2-205ENST00000427455 SH2D4AQ9H788 454 aa29.84■■■□□ 2.37
HERPUD2-205ENST00000427455 EMILIN3Q9NT22 766 aa29.84■■■□□ 2.37
HERPUD2-205ENST00000427455 PNMA3Q9UL41 463 aa29.84■■■□□ 2.37
HERPUD2-205ENST00000427455 ORC4O43929 436 aa29.83■■■□□ 2.37
HERPUD2-205ENST00000427455 TLR2O60603 784 aa29.83■■■□□ 2.37
HERPUD2-205ENST00000427455 FGRP09769 529 aa29.83■■■□□ 2.37
HERPUD2-205ENST00000427455 ZYXQ15942 572 aaKnown RBP29.83■■■□□ 2.37
HERPUD2-205ENST00000427455 ZNF296Q8WUU4 475 aaPredicted RBP29.83■■■□□ 2.37
HERPUD2-205ENST00000427455 CASP8AP2Q9UKL3 1982 aa29.83■■■□□ 2.37
HERPUD2-205ENST00000427455 ADGRA2Q96PE1 1338 aa29.82■■■□□ 2.36
HERPUD2-205ENST00000427455 A0A1W2PRG0 241 aa29.82■■■□□ 2.36
HERPUD2-205ENST00000427455 ZNF213O14771 459 aa29.82■■■□□ 2.36
HERPUD2-205ENST00000427455 TSPY3P0CV98 308 aa29.82■■■□□ 2.36
HERPUD2-205ENST00000427455 TSPY8P0CW00 308 aa29.82■■■□□ 2.36
HERPUD2-205ENST00000427455 PCP11498 1178 aaKnown RBP29.82■■■□□ 2.36
HERPUD2-205ENST00000427455 NBPF3Q9H094 633 aa29.82■■■□□ 2.36
HERPUD2-205ENST00000427455 IGKV6D-41A0A0C4DH26 115 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 CDC45O75419 566 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 CYP2C8P10632 490 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 IMMTQ16891 758 aaKnown RBP29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 CASC1Q6TDU7 716 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 SIAH1Q8IUQ4 282 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 TBC1D10CQ8IV04 446 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 NEDD1Q8NHV4 660 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 STAG1Q8WVM7 1258 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 ESYT1Q9BSJ8 1104 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 RNF41Q9H4P4 317 aaPredicted RBP29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 TMX2Q9Y320 296 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 TACC3Q9Y6A5 838 aa29.81■■■□□ 2.36
HERPUD2-205ENST00000427455 FKTNO75072 461 aa29.8■■■□□ 2.36
HERPUD2-205ENST00000427455 EEF2P13639 858 aaKnown RBP29.8■■■□□ 2.36
HERPUD2-205ENST00000427455 TFAP4Q01664 338 aa29.8■■■□□ 2.36
HERPUD2-205ENST00000427455 FAM47AQ5JRC9 791 aa29.8■■■□□ 2.36
HERPUD2-205ENST00000427455 AKNAD1Q5T1N1 836 aa29.8■■■□□ 2.36
HERPUD2-205ENST00000427455 INCENPQ9NQS7 918 aa29.8■■■□□ 2.36
HERPUD2-205ENST00000427455 TSPY2A6NKD2 308 aa29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 VCAM1P19320 739 aa29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 OSBPP22059 807 aa29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 HOXA7P31268 230 aaPredicted RBP29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 ATP2B2Q01814 1243 aa29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 PTH1RQ03431 593 aa29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 MFSD6Q6ZSS7 791 aa29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 SMCR8Q8TEV9 937 aaPredicted RBP29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 TOMM22Q9NS69 142 aa29.79■■■□□ 2.36
HERPUD2-205ENST00000427455 RANBP6O60518 1105 aaKnown RBP29.78■■■□□ 2.36
HERPUD2-205ENST00000427455 CEP95Q96GE4 821 aa29.78■■■□□ 2.36
HERPUD2-205ENST00000427455 ASCC2Q9H1I8 757 aaPredicted RBP29.78■■■□□ 2.36
HERPUD2-205ENST00000427455 NYAP2Q9P242 653 aa29.78■■■□□ 2.36
HERPUD2-205ENST00000427455 U3KPZ7 1027 aaPredicted RBP29.78■■■□□ 2.36
HERPUD2-205ENST00000427455 IRX3P78415 501 aaPredicted RBP29.77■■■□□ 2.36
HERPUD2-205ENST00000427455 RRP12Q5JTH9 1297 aaKnown RBP29.77■■■□□ 2.36
HERPUD2-205ENST00000427455 KIAA1211Q6ZU35 1233 aa29.77■■■□□ 2.36
HERPUD2-205ENST00000427455 LPAR1Q92633 364 aa29.77■■■□□ 2.36
HERPUD2-205ENST00000427455 VCPKMTQ9H867 229 aa29.77■■■□□ 2.36
HERPUD2-205ENST00000427455 MTMR4Q9NYA4 1195 aa29.77■■■□□ 2.36
HERPUD2-205ENST00000427455 NT5C2P49902 561 aa29.76■■■□□ 2.35
HERPUD2-205ENST00000427455 SP3Q02447 781 aa29.76■■■□□ 2.35
HERPUD2-205ENST00000427455 PPP4R3BQ5MIZ7 849 aa29.76■■■□□ 2.35
HERPUD2-205ENST00000427455 COL13A1Q5TAT6 717 aaPredicted RBP29.76■■■□□ 2.35
HERPUD2-205ENST00000427455 C17orf99Q6UX52 265 aa29.76■■■□□ 2.35
HERPUD2-205ENST00000427455 CPA4Q9UI42 421 aa29.76■■■□□ 2.35
HERPUD2-205ENST00000427455 MYH4Q9Y623 1939 aa29.75■■■□□ 2.35
HERPUD2-205ENST00000427455 TTLL1O95922 423 aa29.75■■■□□ 2.35
HERPUD2-205ENST00000427455 GOPCQ9HD26 462 aa29.75■■■□□ 2.35
HERPUD2-205ENST00000427455 NEDD4P46934 1319 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L15C9J2P7 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L13C9JLJ4 530 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms