RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 SLC34A2O95436 690 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 CCL5P13501 91 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 CAPN2P17655 700 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 AAMPQ13685 434 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 ZYXQ15942 572 aaKnown RBP12.23□□□□□ -0.45
COMMD1-202ENST00000427417 TMEM179Q6ZVK1 233 aa12.23□□□□□ -0.45
COMMD1-202ENST00000427417 CCAR1Q8IX12 1150 aaKnown RBP12.23□□□□□ -0.45
COMMD1-202ENST00000427417 P2RX7Q99572 595 aaKnown RBP12.23□□□□□ -0.45
COMMD1-202ENST00000427417 PRKAB2O43741 272 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 GLRX3O76003 335 aaKnown RBP12.22□□□□□ -0.45
COMMD1-202ENST00000427417 GJB1P08034 283 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 MAPK4P31152 587 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 SEPT2Q15019 361 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 C12orf60Q5U649 245 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 APPBP2Q92624 585 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 CCDC17Q96LX7 622 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 CRBNQ96SW2 442 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 PUS7LQ9H0K6 701 aaKnown RBP12.22□□□□□ -0.45
COMMD1-202ENST00000427417 RNF208Q9H0X6 261 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 SH2D4AQ9H788 454 aa12.22□□□□□ -0.45
COMMD1-202ENST00000427417 ARPP21Q9UBL0 812 aaPredicted RBP12.22□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L12C9JPN9 530 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 USP17L21D6R901 530 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.45
COMMD1-202ENST00000427417 INHAP05111 366 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 CYP2D6P10635 497 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 GNAT2P19087 354 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 VCAM1P19320 739 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 GUCY1A2P33402 732 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 GJA8P48165 433 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 ERVK-24P63145 666 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 CCNA1P78396 465 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 TSHZ3Q63HK5 1081 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 GIMAP6Q6P9H5 292 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 CATSPERGQ6ZRH7 1159 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 ACER1Q8TDN7 264 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 GCC1Q96CN9 775 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.45
COMMD1-202ENST00000427417 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 TXNRD2Q9NNW7 524 aa12.21□□□□□ -0.45
COMMD1-202ENST00000427417 MYH7P12883 1935 aa12.21□□□□□ -0.46
COMMD1-202ENST00000427417 PLXNB2O15031 1838 aa12.21□□□□□ -0.46
COMMD1-202ENST00000427417 BAZ2AQ9UIF9 1905 aaKnown RBP12.2□□□□□ -0.46
COMMD1-202ENST00000427417 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 MX1P20591 662 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 CDK8P49336 464 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
COMMD1-202ENST00000427417 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 C16orf86Q6ZW13 317 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 LPAR1Q92633 364 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 DYNLL2Q96FJ2 89 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 RPAP3Q9H6T3 665 aaPredicted RBP12.2□□□□□ -0.46
COMMD1-202ENST00000427417 CWC22Q9HCG8 908 aaKnown RBP12.2□□□□□ -0.46
COMMD1-202ENST00000427417 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 RABGAP1Q9Y3P9 1069 aa12.2□□□□□ -0.46
COMMD1-202ENST00000427417 HMGCRP04035 888 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 AKR1B1P15121 316 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 ICA1Q05084 483 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 TRIM32Q13049 653 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 SBK1Q52WX2 424 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 ANKRD45Q5TZF3 282 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 LBX2Q6XYB7 198 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
COMMD1-202ENST00000427417 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 OSBP2Q969R2 916 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 GJD2Q9UKL4 321 aa12.19□□□□□ -0.46
COMMD1-202ENST00000427417 CYP2D7A0A087X1C5 515 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 A0A1W2PRG0 241 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 GPAA1O43292 621 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 SGPL1O95470 568 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 XRCC5P13010 732 aaKnown RBP12.18□□□□□ -0.46
COMMD1-202ENST00000427417 COG2Q14746 738 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 Q3C1V9 767 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 PLEKHH3Q7Z736 793 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 CLEC10AQ8IUN9 316 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 U2AF1L4Q8WU68 220 aaKnown RBP12.18□□□□□ -0.46
COMMD1-202ENST00000427417 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 NACAP1Q9BZK3 213 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 TANGO6Q9C0B7 1094 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 PORCNQ9H237 461 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms