RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ADGRA1Q86SQ6 560 aa17.94■□□□□ 0.46
PDAP1-202ENST00000426447 TRMT2AQ8IZ69 625 aaKnown RBP17.94■□□□□ 0.46
PDAP1-202ENST00000426447 LPAR1Q92633 364 aa17.94■□□□□ 0.46
PDAP1-202ENST00000426447 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
PDAP1-202ENST00000426447 DNM1LO00429 736 aa17.93■□□□□ 0.46
PDAP1-202ENST00000426447 CNMDO75829 334 aa17.93■□□□□ 0.46
PDAP1-202ENST00000426447 CYP2E1P05181 493 aaPredicted RBP17.93■□□□□ 0.46
PDAP1-202ENST00000426447 USP5P45974 858 aa17.93■□□□□ 0.46
PDAP1-202ENST00000426447 USP14P54578 494 aa17.93■□□□□ 0.46
PDAP1-202ENST00000426447 DYNLL1P63167 89 aaKnown RBP17.93■□□□□ 0.46
PDAP1-202ENST00000426447 OS9Q13438 667 aaPredicted RBP17.93■□□□□ 0.46
PDAP1-202ENST00000426447 CATSPERGQ6ZRH7 1159 aa17.93■□□□□ 0.46
PDAP1-202ENST00000426447 ATP11BQ9Y2G3 1177 aa17.93■□□□□ 0.46
PDAP1-202ENST00000426447 MYCNP04198 464 aaPredicted RBP17.92■□□□□ 0.46
PDAP1-202ENST00000426447 CYP7A1P22680 504 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 CYP2C19P33261 490 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 RARSP54136 660 aaKnown RBP17.92■□□□□ 0.46
PDAP1-202ENST00000426447 RTP1P59025 263 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 DPP9Q86TI2 863 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 ARRDC4Q8NCT1 418 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 C12orf42Q96LP6 360 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 DBNDD2Q9BQY9 259 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 CABP5Q9NP86 173 aa17.92■□□□□ 0.46
PDAP1-202ENST00000426447 IPO8O15397 1037 aaKnown RBP17.91■□□□□ 0.46
PDAP1-202ENST00000426447 CERKLQ49MI3 558 aaPredicted RBP17.91■□□□□ 0.46
PDAP1-202ENST00000426447 TNNI3KQ59H18 835 aa17.91■□□□□ 0.46
PDAP1-202ENST00000426447 GJC2Q5T442 439 aaPredicted RBP17.91■□□□□ 0.46
PDAP1-202ENST00000426447 TATDN1Q6P1N9 297 aa17.91■□□□□ 0.46
PDAP1-202ENST00000426447 NPLOC4Q8TAT6 608 aa17.91■□□□□ 0.46
PDAP1-202ENST00000426447 GPR108Q9NPR9 543 aa17.91■□□□□ 0.46
PDAP1-202ENST00000426447 PRDM5Q9NQX1 630 aaPredicted RBP17.91■□□□□ 0.46
PDAP1-202ENST00000426447 FPGT-TNNI3KV9GXZ4 949 aa17.91■□□□□ 0.46
PDAP1-202ENST00000426447 IGSF3O75054 1194 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 HOXC6P09630 235 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 ZAP70P43403 619 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 ABCB5Q2M3G0 1257 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 CDX2Q99626 313 aaPredicted RBP17.9■□□□□ 0.46
PDAP1-202ENST00000426447 KIAA1683Q9H0B3 1180 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 BTBD7Q9P203 1132 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 SERPINB13Q9UIV8 391 aa17.9■□□□□ 0.46
PDAP1-202ENST00000426447 KBTBD13C9JR72 458 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 IDH1O75874 414 aaKnown RBP17.89■□□□□ 0.45
PDAP1-202ENST00000426447 VCAM1P19320 739 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 GRB14Q14449 540 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 SHHQ15465 462 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 SLC39A5Q6ZMH5 540 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 MIGA1Q8NAN2 632 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 ACER1Q8TDN7 264 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
PDAP1-202ENST00000426447 SEMA6BQ9H3T3 888 aa17.89■□□□□ 0.45
PDAP1-202ENST00000426447 RPAP3Q9H6T3 665 aaPredicted RBP17.89■□□□□ 0.45
PDAP1-202ENST00000426447 PIH1D3Q9NQM4 214 aaKnown RBP17.89■□□□□ 0.45
PDAP1-202ENST00000426447 CUL9Q8IWT3 2517 aa17.88■□□□□ 0.45
PDAP1-202ENST00000426447 ANO1Q5XXA6 986 aa17.88■□□□□ 0.45
PDAP1-202ENST00000426447 LBX2Q6XYB7 198 aa17.88■□□□□ 0.45
PDAP1-202ENST00000426447 CERS3Q8IU89 383 aa17.88■□□□□ 0.45
PDAP1-202ENST00000426447 TRPV1Q8NER1 839 aa17.88■□□□□ 0.45
PDAP1-202ENST00000426447 MAFAQ8NHW3 353 aaPredicted RBP17.88■□□□□ 0.45
PDAP1-202ENST00000426447 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
PDAP1-202ENST00000426447 SIPA1L1O43166 1804 aa17.87■□□□□ 0.45
PDAP1-202ENST00000426447 STRNO43815 780 aa17.87■□□□□ 0.45
PDAP1-202ENST00000426447 SURF6O75683 361 aaKnown RBP17.87■□□□□ 0.45
PDAP1-202ENST00000426447 BADQ92934 168 aa17.87■□□□□ 0.45
PDAP1-202ENST00000426447 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
PDAP1-202ENST00000426447 EHD4Q9H223 541 aa17.87■□□□□ 0.45
PDAP1-202ENST00000426447 HOXC10Q9NYD6 342 aa17.87■□□□□ 0.45
PDAP1-202ENST00000426447 SPDYE16A6NNV3 312 aaPredicted RBP17.86■□□□□ 0.45
PDAP1-202ENST00000426447 CYBAP13498 195 aa17.86■□□□□ 0.45
PDAP1-202ENST00000426447 ADORA2AP29274 412 aa17.86■□□□□ 0.45
PDAP1-202ENST00000426447 COG2Q14746 738 aa17.86■□□□□ 0.45
PDAP1-202ENST00000426447 C9orf50Q5SZB4 431 aa17.86■□□□□ 0.45
PDAP1-202ENST00000426447 MAGEB6Q8N7X4 407 aa17.86■□□□□ 0.45
PDAP1-202ENST00000426447 SLC5A4Q9NY91 659 aa17.86■□□□□ 0.45
PDAP1-202ENST00000426447 POLR3DP05423 398 aaPredicted RBP17.85■□□□□ 0.45
PDAP1-202ENST00000426447 TRIM27P14373 513 aa17.85■□□□□ 0.45
PDAP1-202ENST00000426447 ADCYAP1R1P41586 468 aa17.85■□□□□ 0.45
PDAP1-202ENST00000426447 TRIM60Q495X7 471 aa17.85■□□□□ 0.45
PDAP1-202ENST00000426447 OLFML2BQ68BL8 750 aa17.85■□□□□ 0.45
PDAP1-202ENST00000426447 FERMT2Q96AC1 680 aa17.85■□□□□ 0.45
PDAP1-202ENST00000426447 MOV10L1Q9BXT6 1211 aaKnown RBP17.85■□□□□ 0.45
PDAP1-202ENST00000426447 MPHOSPH10O00566 681 aaKnown RBP17.84■□□□□ 0.45
PDAP1-202ENST00000426447 SEPT4O43236 478 aa17.84■□□□□ 0.45
PDAP1-202ENST00000426447 SMAD3P84022 425 aaKnown RBP17.84■□□□□ 0.45
PDAP1-202ENST00000426447 MAP3K12Q12852 859 aa17.84■□□□□ 0.45
PDAP1-202ENST00000426447 POLA2Q14181 598 aa17.84■□□□□ 0.45
PDAP1-202ENST00000426447 PLS1Q14651 629 aa17.84■□□□□ 0.45
PDAP1-202ENST00000426447 MYLIPQ8WY64 445 aa17.84■□□□□ 0.45
PDAP1-202ENST00000426447 TANGO6Q9C0B7 1094 aa17.84■□□□□ 0.45
PDAP1-202ENST00000426447 CCDC8Q9H0W5 538 aaPredicted RBP17.84■□□□□ 0.45
PDAP1-202ENST00000426447 TNNQ9UQP3 1299 aa17.84■□□□□ 0.45
PDAP1-202ENST00000426447 BCAR3O75815 825 aa17.83■□□□□ 0.44
PDAP1-202ENST00000426447 ERCC3P19447 782 aa17.83■□□□□ 0.44
PDAP1-202ENST00000426447 PLCD1P51178 756 aa17.83■□□□□ 0.44
PDAP1-202ENST00000426447 ATP8B2P98198 1209 aa17.83■□□□□ 0.44
PDAP1-202ENST00000426447 SEPT2Q15019 361 aa17.83■□□□□ 0.44
PDAP1-202ENST00000426447 PRAMEF19Q5SWL8 479 aa17.83■□□□□ 0.44
PDAP1-202ENST00000426447 SPATC1LQ9H0A9 340 aa17.83■□□□□ 0.44
PDAP1-202ENST00000426447 UNC80Q8N2C7 3258 aa17.82■□□□□ 0.44
PDAP1-202ENST00000426447 FOSL2P15408 326 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms