RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 UBE3CQ15386 1083 aa19.55■□□□□ 0.72
DDR1-234ENST00000424544 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
DDR1-234ENST00000424544 GTF3C2Q8WUA4 911 aaPredicted RBP19.55■□□□□ 0.72
DDR1-234ENST00000424544 SDR42E1Q8WUS8 393 aa19.55■□□□□ 0.72
DDR1-234ENST00000424544 MCM9Q9NXL9 1143 aa19.55■□□□□ 0.72
DDR1-234ENST00000424544 PLXNB2O15031 1838 aa19.55■□□□□ 0.72
DDR1-234ENST00000424544 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 POLR3DP05423 398 aaPredicted RBP19.54■□□□□ 0.72
DDR1-234ENST00000424544 XRCC5P13010 732 aaKnown RBP19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP14P54578 494 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 ERVK-9P63128 1117 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 ERVK-24P63145 666 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 RAB3GAP1Q15042 981 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 LBX2Q6XYB7 198 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 DEFB118Q96PH6 123 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 LRRCC1Q9C099 1032 aa19.54■□□□□ 0.72
DDR1-234ENST00000424544 H0YGN5 161 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 PRKAB2O43741 272 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 CNMDO75829 334 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 HMGCRP04035 888 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 MORN1Q5T089 497 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 MAP3K21Q5TCX8 1036 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 SIAH1Q8IUQ4 282 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 PORCNQ9H237 461 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 ARMT1Q9H993 441 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 CABP5Q9NP86 173 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 RABGAP1Q9Y3P9 1069 aa19.53■□□□□ 0.72
DDR1-234ENST00000424544 A0A1W2PRG0 241 aa19.52■□□□□ 0.72
DDR1-234ENST00000424544 VCAM1P19320 739 aa19.52■□□□□ 0.72
DDR1-234ENST00000424544 MAPK4P31152 587 aa19.52■□□□□ 0.72
DDR1-234ENST00000424544 SEPT2Q15019 361 aa19.52■□□□□ 0.72
DDR1-234ENST00000424544 EXOC6Q8TAG9 804 aa19.52■□□□□ 0.72
DDR1-234ENST00000424544 RPTORQ8N122 1335 aa19.51■□□□□ 0.71
DDR1-234ENST00000424544 SZT2Q5T011 3432 aa19.51■□□□□ 0.71
DDR1-234ENST00000424544 SMARCA5O60264 1052 aaPredicted RBP19.51■□□□□ 0.71
DDR1-234ENST00000424544 CYP2D6P10635 497 aa19.51■□□□□ 0.71
DDR1-234ENST00000424544 TRIM32Q13049 653 aa19.51■□□□□ 0.71
DDR1-234ENST00000424544 C12orf60Q5U649 245 aa19.51■□□□□ 0.71
DDR1-234ENST00000424544 TRIB2Q92519 343 aa19.51■□□□□ 0.71
DDR1-234ENST00000424544 NUDT12Q9BQG2 462 aa19.51■□□□□ 0.71
DDR1-234ENST00000424544 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.51■□□□□ 0.71
DDR1-234ENST00000424544 SMIM22K7EJ46 135 aa19.5■□□□□ 0.71
DDR1-234ENST00000424544 FARP2O94887 1054 aaPredicted RBP19.5■□□□□ 0.71
DDR1-234ENST00000424544 MBD4O95243 580 aa19.5■□□□□ 0.71
DDR1-234ENST00000424544 MNX1P50219 401 aaPredicted RBP19.5■□□□□ 0.71
DDR1-234ENST00000424544 GPR142Q7Z601 462 aa19.5■□□□□ 0.71
DDR1-234ENST00000424544 SLC44A5Q8NCS7 719 aa19.5■□□□□ 0.71
DDR1-234ENST00000424544 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.5■□□□□ 0.713e-7■■□□□ 11.5
DDR1-234ENST00000424544 PUS7LQ9H0K6 701 aaKnown RBP19.5■□□□□ 0.71
DDR1-234ENST00000424544 PCDH10Q9P2E7 1040 aa19.5■□□□□ 0.71
DDR1-234ENST00000424544 SWAP70Q9UH65 585 aa19.5■□□□□ 0.71
DDR1-234ENST00000424544 COLQQ9Y215 455 aaPredicted RBP19.5■□□□□ 0.71
DDR1-234ENST00000424544 TFRCP02786 760 aaKnown RBP19.49■□□□□ 0.71
DDR1-234ENST00000424544 CYP2B6P20813 491 aa19.49■□□□□ 0.71
DDR1-234ENST00000424544 AAMPQ13685 434 aa19.49■□□□□ 0.71
DDR1-234ENST00000424544 ZYXQ15942 572 aaKnown RBP19.49■□□□□ 0.71
DDR1-234ENST00000424544 SOCS4Q8WXH5 440 aa19.49■□□□□ 0.71
DDR1-234ENST00000424544 DYNLL2Q96FJ2 89 aa19.49■□□□□ 0.71
DDR1-234ENST00000424544 FEZ1Q99689 392 aa19.49■□□□□ 0.71
DDR1-234ENST00000424544 ECHDC1Q9NTX5 307 aa19.49■□□□□ 0.71
DDR1-234ENST00000424544 SPDYE16A6NNV3 312 aaPredicted RBP19.48■□□□□ 0.71
DDR1-234ENST00000424544 USP17L12C9JPN9 530 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 USP17L21D6R901 530 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 IGHA2P01877 340 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 KIAA1755Q5JYT7 1200 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 TMEM179Q6ZVK1 233 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 PLEKHH3Q7Z736 793 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 DPF3Q92784 378 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 HTATIP2Q9BUP3 242 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 BCL11AQ9H165 835 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 PRO3102Q9H379 93 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 HMX1Q9NP08 348 aaPredicted RBP19.48■□□□□ 0.71
DDR1-234ENST00000424544 BTBD7Q9P203 1132 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 NAV1Q8NEY1 1877 aa19.48■□□□□ 0.71
DDR1-234ENST00000424544 CDK8P49336 464 aa19.47■□□□□ 0.71
DDR1-234ENST00000424544 ERICH6BQ5W0A0 696 aa19.47■□□□□ 0.71
DDR1-234ENST00000424544 TRMT44Q8IYL2 757 aaKnown RBP19.47■□□□□ 0.71
DDR1-234ENST00000424544 ANKLE1Q8NAG6 615 aa19.47■□□□□ 0.71
DDR1-234ENST00000424544 STRBPQ96SI9 672 aaKnown RBP19.47■□□□□ 0.71
DDR1-234ENST00000424544 PAGR1Q9BTK6 254 aa19.47■□□□□ 0.71
DDR1-234ENST00000424544 RPAP3Q9H6T3 665 aaPredicted RBP19.47■□□□□ 0.71
DDR1-234ENST00000424544 OGDHLQ9ULD0 1010 aa19.47■□□□□ 0.71
DDR1-234ENST00000424544 PCDHB15Q9Y5E8 787 aa19.47■□□□□ 0.71
DDR1-234ENST00000424544 TRIOBPQ9H2D6 2365 aa19.47■□□□□ 0.71
DDR1-234ENST00000424544 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
DDR1-234ENST00000424544 AKR1B1P15121 316 aa19.46■□□□□ 0.71
DDR1-234ENST00000424544 FXR1P51114 621 aaKnown RBP eCLIP19.46■□□□□ 0.71
DDR1-234ENST00000424544 COG2Q14746 738 aa19.46■□□□□ 0.71
DDR1-234ENST00000424544 ZSCAN25Q6NSZ9 544 aa19.46■□□□□ 0.71
DDR1-234ENST00000424544 CTR9Q6PD62 1173 aa19.46■□□□□ 0.71
DDR1-234ENST00000424544 C16orf86Q6ZW13 317 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms