RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 ZNF341Q9BYN7 854 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 MKNK2Q9HBH9 465 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 ZNF287Q9HBT7 754 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 TOMM22Q9NS69 142 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 PHF20L1A8MW92 1017 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 GJB2P29033 226 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 SHROOM1Q2M3G4 852 aaPredicted RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 ANP32BQ92688 251 aaKnown RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 CHAMP1Q96JM3 812 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 KRT23Q9C075 422 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 PASKQ96RG2 1323 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 RANBP6O60518 1105 aaKnown RBP16.46■□□□□ 0.23
ACTN4-203ENST00000424234 KDM4AO75164 1064 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 GDF11O95390 407 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 F13A1P00488 732 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 AKR1B1P15121 316 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 NF2P35240 595 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 TRDNQ13061 729 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 ME3Q16798 604 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 LRSAM1Q6UWE0 723 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 SMC1BQ8NDV3 1235 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
ACTN4-203ENST00000424234 NEK1Q96PY6 1258 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 TMEM63CQ9P1W3 806 aa16.46■□□□□ 0.23
ACTN4-203ENST00000424234 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
ACTN4-203ENST00000424234 TOMM70O94826 608 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 ANTXR2P58335 489 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 PRKG1Q13976 671 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 CSPP1Q1MSJ5 1256 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-203ENST00000424234 FAM47AQ5JRC9 791 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 CYB5R4Q7L1T6 521 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.45■□□□□ 0.22
ACTN4-203ENST00000424234 ESR2Q92731 530 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 KLRG1Q96E93 195 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 ZNF408Q9H9D4 720 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 ZNF112Q9UJU3 913 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 TPCN1Q9ULQ1 816 aa16.45■□□□□ 0.22
ACTN4-203ENST00000424234 TSPY2A6NKD2 308 aa16.44■□□□□ 0.22
ACTN4-203ENST00000424234 USP2O75604 605 aaPredicted RBP16.44■□□□□ 0.22
ACTN4-203ENST00000424234 INPP5BP32019 993 aa16.44■□□□□ 0.22
ACTN4-203ENST00000424234 NT5C2P49902 561 aa16.44■□□□□ 0.22
ACTN4-203ENST00000424234 JAG1P78504 1218 aa16.44■□□□□ 0.22
ACTN4-203ENST00000424234 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
ACTN4-203ENST00000424234 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
ACTN4-203ENST00000424234 BAZ2BQ9UIF8 2168 aaKnown RBP16.44■□□□□ 0.22
ACTN4-203ENST00000424234 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 TSPY3P0CV98 308 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 TSPY8P0CW00 308 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 MOB2Q70IA6 237 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 ZNF444Q8N0Y2 327 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 CCDC17Q96LX7 622 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 ZSWIM5Q9P217 1185 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 ZBTB21Q9ULJ3 1066 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 CELF2O95319 508 aaKnown RBP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 GH2P01242 217 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 PDCP20941 246 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 MCM5P33992 734 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 CAP2P40123 477 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 TFAP4Q01664 338 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 CHST3Q7LGC8 479 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 NEDD1Q8NHV4 660 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 TCEANC2Q96MN5 208 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-203ENST00000424234 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
ACTN4-203ENST00000424234 COL11A1P12107 1806 aaPredicted RBP16.42■□□□□ 0.22
ACTN4-203ENST00000424234 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
ACTN4-203ENST00000424234 PRC1O43663 620 aa16.42■□□□□ 0.22
ACTN4-203ENST00000424234 NMT2O60551 498 aa16.42■□□□□ 0.22
ACTN4-203ENST00000424234 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
ACTN4-203ENST00000424234 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
ACTN4-203ENST00000424234 IREB2P48200 963 aaKnown RBP16.42■□□□□ 0.22
ACTN4-203ENST00000424234 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
ACTN4-203ENST00000424234 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
ACTN4-203ENST00000424234 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
ACTN4-203ENST00000424234 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
ACTN4-203ENST00000424234 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
ACTN4-203ENST00000424234 GBA2Q9HCG7 927 aaPredicted RBP16.42■□□□□ 0.22
ACTN4-203ENST00000424234 TNKSO95271 1327 aa16.41■□□□□ 0.22
ACTN4-203ENST00000424234 RLFQ13129 1914 aa16.41■□□□□ 0.22
ACTN4-203ENST00000424234 MPHOSPH10O00566 681 aaKnown RBP16.41■□□□□ 0.22
ACTN4-203ENST00000424234 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
ACTN4-203ENST00000424234 VGLL4Q14135 290 aa16.41■□□□□ 0.22
ACTN4-203ENST00000424234 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-203ENST00000424234 CST9Q5W186 159 aa16.41■□□□□ 0.22
ACTN4-203ENST00000424234 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-203ENST00000424234 SCYL3Q8IZE3 742 aa16.41■□□□□ 0.22
ACTN4-203ENST00000424234 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
ACTN4-203ENST00000424234 ZKSCAN4Q969J2 545 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms