RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SLC5A1P13866 664 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 IRX5P78411 483 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-204ENST00000424143 RAD9BQ6WBX8 426 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 PAGE5Q96GU1 130 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 TMEM51Q9NW97 253 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 MYH6P13533 1939 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 SYNRGQ9UMZ2 1314 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 ERICH4A6NGS2 130 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 IRS4O14654 1257 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-204ENST00000424143 MBD4O95243 580 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 TRAPPC10P48553 1259 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 GRIN1Q05586 938 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 RBL2Q08999 1139 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 ANKZF1Q9H8Y5 726 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 RBM28Q9NW13 759 aaKnown RBP17.28■□□□□ 0.36
C9orf3-204ENST00000424143 L1RE1Q9UN81 338 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
C9orf3-204ENST00000424143 SEC23AQ15436 765 aa17.27■□□□□ 0.36
C9orf3-204ENST00000424143 CABLES1Q8TDN4 633 aa17.27■□□□□ 0.36
C9orf3-204ENST00000424143 PHF20Q9BVI0 1012 aa17.27■□□□□ 0.36
C9orf3-204ENST00000424143 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
C9orf3-204ENST00000424143 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
C9orf3-204ENST00000424143 POLR3GO15318 223 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-204ENST00000424143 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-204ENST00000424143 MCM3P25205 808 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 KRT2P35908 639 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 WDR93Q6P2C0 686 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 TOM1L2Q6ZVM7 507 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 VIPAS39Q9H9C1 493 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 RWDD2AQ9UIY3 292 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 ADAM21Q9UKJ8 722 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 DLEC1Q9Y238 1755 aa17.26■□□□□ 0.35
C9orf3-204ENST00000424143 SOWAHDA6NJG2 315 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 TEX33O43247 280 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 IVLP07476 585 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 FGRP09769 529 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 CALM1P0DP23 149 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 CALM2P0DP24 149 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 CALM3P0DP25 149 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 NT5C2P49902 561 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 CTDSPL2Q05D32 466 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 FUT2Q10981 343 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 SPECC1Q5M775 1068 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 CYP26C1Q6V0L0 522 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
C9orf3-204ENST00000424143 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-204ENST00000424143 MAGEB6Q8N7X4 407 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 NAPGQ99747 312 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-204ENST00000424143 MYL10Q9BUA6 226 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 ACBD3Q9H3P7 528 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 AKAP17AQ02040 695 aaKnown RBP17.25■□□□□ 0.35
C9orf3-204ENST00000424143 KARSQ15046 597 aaKnown RBP17.25■□□□□ 0.35
C9orf3-204ENST00000424143 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 ANKRD20A12PQ8NF67 263 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 TNFRSF25Q93038 417 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 DESI2Q9BSY9 194 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 BRMS1Q9HCU9 246 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 CABP5Q9NP86 173 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 RMND1Q9NWS8 449 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 NUP98P52948 1817 aa17.25■□□□□ 0.35
C9orf3-204ENST00000424143 GTPBP6O43824 516 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-204ENST00000424143 GYPCP04921 128 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
C9orf3-204ENST00000424143 ACTN2P35609 894 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 ST5P78524 1137 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 ATP2C1P98194 919 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-204ENST00000424143 NR5A1Q13285 461 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 MTF1Q14872 753 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 ZSCAN26Q16670 478 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 ESR2Q92731 530 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 RPGRIP1Q96KN7 1286 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 MED4Q9NPJ6 270 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 SEC31BQ9NQW1 1179 aa17.24■□□□□ 0.35
C9orf3-204ENST00000424143 CTAGE15A4D2H0 777 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 CTAGE8P0CG41 777 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 ARHGAP25P42331 645 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 E2F4Q16254 413 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 PKN1Q16512 942 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 ZNF569Q5MCW4 686 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 CTAGE6Q86UF2 777 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 CTAGE4Q8IX94 777 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 FAM71BQ8TC56 605 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 UBAC1Q9BSL1 405 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
C9orf3-204ENST00000424143 RREB1Q92766 1687 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 A0A1W2PQC6 194 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 UBE2Q2LH0YL09 131 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 DDAH1O94760 285 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 TDO2P48775 406 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 AMPD2Q01433 879 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 PPARAQ07869 468 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 RASGRF1Q13972 1273 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 USP49Q70CQ1 688 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 OXER1Q8TDS5 423 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms