RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ATF7IPQ6VMQ6 1270 aa20.54■□□□□ 0.88
CHCHD3-202ENST00000423635 PRKAG2Q9UGJ0 569 aa20.54■□□□□ 0.88
CHCHD3-202ENST00000423635 SPTBN5Q9NRC6 3674 aaKnown RBP20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 HLA-DOAP06340 250 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 ATN1P54259 1190 aaPredicted RBP20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 ATP2B2Q01814 1243 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 GRB14Q14449 540 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 CDX2Q99626 313 aaPredicted RBP20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 SEMA6BQ9H3T3 888 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 FRMPD3Q5JV73 1810 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 MAST2Q6P0Q8 1798 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 GH2P01242 217 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 USP14P54578 494 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 RTP1P59025 263 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 NPLOC4Q8TAT6 608 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 GPR108Q9NPR9 543 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 SNRKQ9NRH2 765 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
CHCHD3-202ENST00000423635 CNGA1P29973 690 aa20.52■□□□□ 0.87
CHCHD3-202ENST00000423635 SHHQ15465 462 aa20.52■□□□□ 0.87
CHCHD3-202ENST00000423635 TRPV1Q8NER1 839 aa20.52■□□□□ 0.87
CHCHD3-202ENST00000423635 ZNF512BQ96KM6 892 aaPredicted RBP20.52■□□□□ 0.87
CHCHD3-202ENST00000423635 KIAA1683Q9H0B3 1180 aa20.52■□□□□ 0.87
CHCHD3-202ENST00000423635 BTBD7Q9P203 1132 aa20.52■□□□□ 0.87
CHCHD3-202ENST00000423635 SAP30BPQ9UHR5 308 aaKnown RBP20.52■□□□□ 0.87
CHCHD3-202ENST00000423635 FOCADQ5VW36 1801 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 CDK5RAP2Q96SN8 1893 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 PNMA6EA0A0J9YXQ4 647 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 CYP2C19P33261 490 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 CCDC158Q5M9N0 1113 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 SLC39A5Q6ZMH5 540 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 ARRDC4Q8NCT1 418 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 IVNS1ABPQ9Y6Y0 642 aa20.51■□□□□ 0.87
CHCHD3-202ENST00000423635 PRUNE2Q8WUY3 3088 aa20.5■□□□□ 0.87
CHCHD3-202ENST00000423635 GNAI2P04899 355 aa20.5■□□□□ 0.87
CHCHD3-202ENST00000423635 CYBAP13498 195 aa20.5■□□□□ 0.87
CHCHD3-202ENST00000423635 VCAM1P19320 739 aa20.5■□□□□ 0.87
CHCHD3-202ENST00000423635 TTC39AQ5SRH9 613 aa20.5■□□□□ 0.87
CHCHD3-202ENST00000423635 WDR78Q5VTH9 848 aa20.5■□□□□ 0.87
CHCHD3-202ENST00000423635 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 DYNLL1P63167 89 aaKnown RBP20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 SMAD3P84022 425 aaKnown RBP20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 ZYXQ15942 572 aaKnown RBP20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 C9orf50Q5SZB4 431 aa20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 GJC2Q5T442 439 aaPredicted RBP20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 OLFML2BQ68BL8 750 aa20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 MAFAQ8NHW3 353 aaPredicted RBP20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 FEZ1Q99689 392 aa20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 EHD4Q9H223 541 aa20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 ATP11BQ9Y2G3 1177 aa20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
CHCHD3-202ENST00000423635 LTBP2Q14767 1821 aa20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 SPDYE16A6NNV3 312 aaPredicted RBP20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 STRNO43815 780 aa20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 SNX17Q15036 470 aa20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 CERS3Q8IU89 383 aa20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 ACER1Q8TDN7 264 aa20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 DBNDD2Q9BQY9 259 aa20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 SERPINB13Q9UIV8 391 aa20.48■□□□□ 0.87
CHCHD3-202ENST00000423635 RLFQ13129 1914 aa20.47■□□□□ 0.87
CHCHD3-202ENST00000423635 ZAP70P43403 619 aa20.47■□□□□ 0.87
CHCHD3-202ENST00000423635 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
CHCHD3-202ENST00000423635 C1orf53Q5VUE5 145 aa20.47■□□□□ 0.87
CHCHD3-202ENST00000423635 TTYH1Q9H313 450 aaPredicted RBP20.47■□□□□ 0.87
CHCHD3-202ENST00000423635 PIH1D3Q9NQM4 214 aaKnown RBP20.47■□□□□ 0.87
CHCHD3-202ENST00000423635 PRDM6Q9NQX0 595 aa20.47■□□□□ 0.87
CHCHD3-202ENST00000423635 CDH23Q9H251 3354 aa20.46■□□□□ 0.87
CHCHD3-202ENST00000423635 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
CHCHD3-202ENST00000423635 CYP7A1P22680 504 aa20.46■□□□□ 0.87
CHCHD3-202ENST00000423635 RAB3GAP1Q15042 981 aa20.46■□□□□ 0.87
CHCHD3-202ENST00000423635 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
CHCHD3-202ENST00000423635 DPP9Q86TI2 863 aa20.46■□□□□ 0.87
CHCHD3-202ENST00000423635 BADQ92934 168 aa20.46■□□□□ 0.87
CHCHD3-202ENST00000423635 KBTBD13C9JR72 458 aa20.45■□□□□ 0.86
CHCHD3-202ENST00000423635 SEPT4O43236 478 aa20.45■□□□□ 0.86
CHCHD3-202ENST00000423635 TTC6Q86TZ1 520 aa20.45■□□□□ 0.86
CHCHD3-202ENST00000423635 RPAP3Q9H6T3 665 aaPredicted RBP20.45■□□□□ 0.86
CHCHD3-202ENST00000423635 CABP5Q9NP86 173 aa20.45■□□□□ 0.86
CHCHD3-202ENST00000423635 HOXC10Q9NYD6 342 aa20.45■□□□□ 0.86
CHCHD3-202ENST00000423635 ADORA2AP29274 412 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 GUCY1A2P33402 732 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 USP5P45974 858 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 POLA2Q14181 598 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 COG2Q14746 738 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 TRIM60Q495X7 471 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 SHCBP1Q8NEM2 672 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 MYLIPQ8WY64 445 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 MOV10L1Q9BXT6 1211 aaKnown RBP20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 PDLIM7Q9NR12 457 aa20.44■□□□□ 0.86
CHCHD3-202ENST00000423635 TRIM43BA6NCK2 446 aa20.43■□□□□ 0.86
CHCHD3-202ENST00000423635 TRIM43Q96BQ3 446 aaPredicted RBP20.43■□□□□ 0.86
CHCHD3-202ENST00000423635 PRDM5Q9NQX1 630 aaPredicted RBP20.43■□□□□ 0.86
CHCHD3-202ENST00000423635 MYO5AQ9Y4I1 1855 aaKnown RBP20.43■□□□□ 0.86
CHCHD3-202ENST00000423635 MYH1P12882 1939 aa20.42■□□□□ 0.86
CHCHD3-202ENST00000423635 TMEM265A0A087WTH1 108 aa20.42■□□□□ 0.86
CHCHD3-202ENST00000423635 IPO8O15397 1037 aaKnown RBP20.42■□□□□ 0.86
CHCHD3-202ENST00000423635 COBLO75128 1261 aa20.42■□□□□ 0.86
CHCHD3-202ENST00000423635 SHMT1P34896 483 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms