RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TOMM22Q9NS69 142 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 GINM1Q9NU53 330 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11□□□□□ -0.65
PDGFC-202ENST00000422544 AFG3L2Q9Y4W6 797 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 NAV1Q8NEY1 1877 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
PDGFC-202ENST00000422544 TRIM75PA6NK02 468 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 RANBP6O60518 1105 aaKnown RBP10.99□□□□□ -0.65
PDGFC-202ENST00000422544 CYP21A2P08686 494 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 FGRP09769 529 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 ZBTB48P10074 688 aaPredicted RBP10.99□□□□□ -0.65
PDGFC-202ENST00000422544 TFAP4Q01664 338 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 SPP2Q13103 211 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 TMEM179Q6ZVK1 233 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDGFC-202ENST00000422544 RNF41Q9H4P4 317 aaPredicted RBP10.99□□□□□ -0.65
PDGFC-202ENST00000422544 SIPA1L1O43166 1804 aa10.99□□□□□ -0.65
PDGFC-202ENST00000422544 KIAA0100Q14667 2235 aaKnown RBP10.99□□□□□ -0.65
PDGFC-202ENST00000422544 DDX60LQ5H9U9 1706 aaKnown RBP10.98□□□□□ -0.65
PDGFC-202ENST00000422544 CXCL11O14625 94 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 ORC4O43929 436 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 REC8O95072 547 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 TSPY3P0CV98 308 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 TSPY8P0CW00 308 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 SNAPC2Q13487 334 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 NECTIN1Q15223 517 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 CREB3L3Q68CJ9 461 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 SIAH1Q8IUQ4 282 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 ZNF280CQ8ND82 737 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 ACER1Q8TDN7 264 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 WDR18Q9BV38 432 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 AS3MTQ9HBK9 375 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 KCNH4Q9UQ05 1017 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 TAF6LQ9Y6J9 622 aa10.98□□□□□ -0.65
PDGFC-202ENST00000422544 MANSC4A6NHS7 340 aaPredicted RBP10.97□□□□□ -0.65
PDGFC-202ENST00000422544 TSPY2A6NKD2 308 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 SLC27A2O14975 620 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 PCP11498 1178 aaKnown RBP10.97□□□□□ -0.65
PDGFC-202ENST00000422544 GTF2A2P52657 109 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 ATP2B2Q01814 1243 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 NEDD1Q8NHV4 660 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 BRI3BPQ8WY22 251 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 TBC1D2Q9BYX2 928 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 KANSL2Q9H9L4 492 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 NEDD4P46934 1319 aa10.97□□□□□ -0.65
PDGFC-202ENST00000422544 CCL15-CCL14A0A0B4J2E2 113 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 IGKV6D-41A0A0C4DH26 115 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 A0A1W2PRG0 241 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 TESPA1A2RU30 521 aaPredicted RBP10.96□□□□□ -0.65
PDGFC-202ENST00000422544 B4E1Z4 1266 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 USP17L10C9JJH3 530 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 E7EWF7 191 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 NMT2O60551 498 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 SEC24BO95487 1268 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 CETPP11597 493 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 EEF2P13639 858 aaKnown RBP10.96□□□□□ -0.65
PDGFC-202ENST00000422544 TM4SF4P48230 202 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 BACE1P56817 501 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 ICA1Q05084 483 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 MTMR2Q13614 643 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 CCL15Q16663 113 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 STOX1Q6ZVD7 989 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 ESR2Q92731 530 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 CEP95Q96GE4 821 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 FEZ1Q99689 392 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 PTPN18Q99952 460 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 USP26Q9BXU7 913 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 IL17RBQ9NRM6 502 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 ZSWIM5Q9P217 1185 aa10.96□□□□□ -0.65
PDGFC-202ENST00000422544 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
PDGFC-202ENST00000422544 KDM4AO75164 1064 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 HMGCS2P54868 508 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 INHBEP58166 350 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 SREBF2Q12772 1141 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 TRDNQ13061 729 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 MOGSQ13724 837 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
PDGFC-202ENST00000422544 C8orf34Q49A92 452 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 RNF20Q5VTR2 975 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 GADL1Q6ZQY3 521 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 FASTKD5Q7L8L6 764 aaKnown RBP10.95□□□□□ -0.66
PDGFC-202ENST00000422544 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
PDGFC-202ENST00000422544 REM2Q8IYK8 340 aaPredicted RBP10.95□□□□□ -0.66
PDGFC-202ENST00000422544 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 KRT23Q9C075 422 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 CNNM2Q9H8M5 875 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 MTMR4Q9NYA4 1195 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 CLIP2Q9UDT6 1046 aa10.95□□□□□ -0.66
PDGFC-202ENST00000422544 RBBP6Q7Z6E9 1792 aaKnown RBP10.95□□□□□ -0.66
PDGFC-202ENST00000422544 OTOFQ9HC10 1997 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 TRIOBPQ9H2D6 2365 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 C19orf81C9J6K1 198 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 BTBD19C9JJ37 291 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 IGF2BP3O00425 579 aaKnown RBP eCLIP10.94□□□□□ -0.66
PDGFC-202ENST00000422544 CA12O43570 354 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms