RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 RWDD1Q9H446 243 aaPredicted RBP10.37□□□□□ -0.75
MDC1-204ENST00000422266 CWC22Q9HCG8 908 aaKnown RBP10.37□□□□□ -0.75
MDC1-204ENST00000422266 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 KIAA0100Q14667 2235 aaKnown RBP10.37□□□□□ -0.75
MDC1-204ENST00000422266 USP17L12C9JPN9 530 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 USP17L21D6R901 530 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 SLC3A2P08195 630 aaKnown RBP10.36□□□□□ -0.75
MDC1-204ENST00000422266 MX1P20591 662 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 CAP1Q01518 475 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 SBK1Q52WX2 424 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
MDC1-204ENST00000422266 LBX2Q6XYB7 198 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 C16orf86Q6ZW13 317 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 MB21D1Q8N884 522 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 NUDT12Q9BQG2 462 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 KANSL2Q9H9L4 492 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 EMILIN3Q9NT22 766 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 HOXC10Q9NYD6 342 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 RABGAP1Q9Y3P9 1069 aa10.36□□□□□ -0.75
MDC1-204ENST00000422266 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 POTEFA5A3E0 1075 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 GJB1P08034 283 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 VCAM1P19320 739 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 CTGFP29279 349 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 CDK8P49336 464 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 ERVK-24P63145 666 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 ANKRD45Q5TZF3 282 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 CATSPERGQ6ZRH7 1159 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 STRBPQ96SI9 672 aaKnown RBP10.35□□□□□ -0.75
MDC1-204ENST00000422266 CRBNQ96SW2 442 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 P2RX7Q99572 595 aaKnown RBP10.35□□□□□ -0.75
MDC1-204ENST00000422266 FSD1Q9BTV5 496 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 PUS7LQ9H0K6 701 aaKnown RBP10.35□□□□□ -0.75
MDC1-204ENST00000422266 RNF208Q9H0X6 261 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 MKNK2Q9HBH9 465 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 NAV1Q8NEY1 1877 aa10.35□□□□□ -0.75
MDC1-204ENST00000422266 RBBP6Q7Z6E9 1792 aaKnown RBP10.34□□□□□ -0.75
MDC1-204ENST00000422266 PDE4DIPQ5VU43 2346 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 PATL2C9JE40 543 aaKnown RBP10.34□□□□□ -0.75
MDC1-204ENST00000422266 GPAA1O43292 621 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 ECM2O94769 699 aaPredicted RBP10.34□□□□□ -0.75
MDC1-204ENST00000422266 HMGCRP04035 888 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 APPP05067 770 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 XRCC5P13010 732 aaKnown RBP10.34□□□□□ -0.75
MDC1-204ENST00000422266 CCL5P13501 91 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 GJA8P48165 433 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 TDO2P48775 406 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 JAG1P78504 1218 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 ICA1Q05084 483 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 COG2Q14746 738 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 SEPT2Q15019 361 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 ZYXQ15942 572 aaKnown RBP10.34□□□□□ -0.75
MDC1-204ENST00000422266 CTR9Q6PD62 1173 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 EVI5LQ96CN4 794 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 GOPCQ9HD26 462 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 GABRQQ9UN88 632 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 IVNS1ABPQ9Y6Y0 642 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 MYH7P12883 1935 aa10.34□□□□□ -0.75
MDC1-204ENST00000422266 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
MDC1-204ENST00000422266 HTTP42858 3142 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 PRKAB2O43741 272 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 EN2P19622 333 aaPredicted RBP10.33□□□□□ -0.76
MDC1-204ENST00000422266 PDE4BQ07343 736 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 ZNF444Q8N0Y2 327 aaPredicted RBP10.33□□□□□ -0.76
MDC1-204ENST00000422266 PI4K2BQ8TCG2 481 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 OSBP2Q969R2 916 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 PAGR1Q9BTK6 254 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 HTATIP2Q9BUP3 242 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 RPAP3Q9H6T3 665 aaPredicted RBP10.33□□□□□ -0.76
MDC1-204ENST00000422266 SLC5A4Q9NY91 659 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 STAP2Q9UGK3 403 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 SYNPO2Q9UMS6 1093 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 TMX2Q9Y320 296 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 MGAMO43451 1857 aa10.33□□□□□ -0.76
MDC1-204ENST00000422266 CENPFP49454 3210 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 ROBO3Q96MS0 1386 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 GSG1L2A8MUP6 293 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 WDR46O15213 610 aaKnown RBP10.32□□□□□ -0.76
MDC1-204ENST00000422266 STRNO43815 780 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 INHAP05111 366 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 GUCY1A2P33402 732 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 RGS2P41220 211 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 MFAP1P55081 439 aaKnown RBP10.32□□□□□ -0.76
MDC1-204ENST00000422266 PLEKHH3Q7Z736 793 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 ACER1Q8TDN7 264 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 DYNLL2Q96FJ2 89 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 NAPBQ9H115 298 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 VCPKMTQ9H867 229 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 HMX1Q9NP08 348 aaPredicted RBP10.32□□□□□ -0.76
MDC1-204ENST00000422266 RBPJLQ9UBG7 517 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 GJD2Q9UKL4 321 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 RPTORQ8N122 1335 aa10.32□□□□□ -0.76
MDC1-204ENST00000422266 MINDY4BA8MYZ0 360 aa10.31□□□□□ -0.76
MDC1-204ENST00000422266 SGPL1O95470 568 aa10.31□□□□□ -0.76
MDC1-204ENST00000422266 MYCP01106 439 aaPredicted RBP10.31□□□□□ -0.76
MDC1-204ENST00000422266 CYP2D6P10635 497 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms