RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 MTHFD1LQ6UB35 978 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 DHRS1Q96LJ7 313 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 HMX1Q9NP08 348 aaPredicted RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 RPAP1Q9BWH6 1393 aaPredicted RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 SLC27A2O14975 620 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 SHOX2O60902 331 aaPredicted RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 ZNF189O75820 626 aaPredicted RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 SMNDC1O75940 238 aaKnown RBP eCLIP9.81□□□□□ -0.84
SSB-205ENST00000422006 SKIDA1Q1XH10 827 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 RSRC2Q7L4I2 434 aaKnown RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 TMEM110Q86TL2 294 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 MARCH10Q8NA82 808 aaPredicted RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 PRR7Q8TB68 274 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 HNRNPLLQ8WVV9 542 aaKnown RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 FAM81BQ96LP2 452 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 NACA2Q9H009 215 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 PKN1Q16512 942 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 FAM114A1Q8IWE2 563 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 AFAP1L1Q8TED9 768 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 RABGGTAQ92696 567 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 HOOK2Q96ED9 719 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 GORASP1Q9BQQ3 440 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 YIPF3Q9GZM5 350 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 CBX8Q9HC52 389 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 PRR36Q9H6K5 1346 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 USP6P35125 1406 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 M0R2C6 588 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 E2F6O75461 281 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 FERP16591 822 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 TRPC1P48995 793 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 TMED1Q13445 227 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 SNCBQ16143 134 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 BEND6Q5SZJ8 279 aaPredicted RBP9.8□□□□□ -0.84
SSB-205ENST00000422006 E4F1Q66K89 784 aaPredicted RBP9.8□□□□□ -0.84
SSB-205ENST00000422006 TMC6Q7Z403 805 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 SNRNP27Q8WVK2 155 aaKnown RBP9.8□□□□□ -0.84
SSB-205ENST00000422006 ARHGAP45Q92619 1136 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 MS4A3Q96HJ5 214 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 WWC3Q9ULE0 1092 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 CORO1CQ9ULV4 474 aaPredicted RBP9.8□□□□□ -0.84
SSB-205ENST00000422006 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
SSB-205ENST00000422006 TCHHQ07283 1943 aa9.8□□□□□ -0.84
SSB-205ENST00000422006 CYP27B1O15528 508 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
SSB-205ENST00000422006 CDC45O75419 566 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 GCP02774 474 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 MYBPC3Q14896 1274 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 CHRNA2Q15822 529 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 BZW1Q7L1Q6 419 aaKnown RBP9.79□□□□□ -0.84
SSB-205ENST00000422006 BRAPQ7Z569 592 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
SSB-205ENST00000422006 CCDC50Q8IVM0 306 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 ZFAND2BQ8WV99 257 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 CUL5Q93034 780 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 RMDN2Q96LZ7 410 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 ALG2Q9H553 416 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 PAPOLBQ9NRJ5 636 aaKnown RBP9.79□□□□□ -0.84
SSB-205ENST00000422006 RPSAP08865 295 aaKnown RBP9.79□□□□□ -0.84
SSB-205ENST00000422006 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 RPL13P26373 211 aaKnown RBP9.79□□□□□ -0.84
SSB-205ENST00000422006 ETF1P62495 437 aaKnown RBP9.79□□□□□ -0.84
SSB-205ENST00000422006 TYRO3Q06418 890 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 PLCB4Q15147 1175 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 SAPCD2Q86UD0 394 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 FAM228AQ86W67 206 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 PIP4P2Q8N4L2 257 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 LNPKQ9C0E8 428 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 ZNF510Q9Y2H8 683 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
SSB-205ENST00000422006 EP400Q96L91 3159 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 PDHBP11177 359 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 YBX3P16989 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
SSB-205ENST00000422006 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 CHD1LQ86WJ1 897 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 STAG2Q8N3U4 1231 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 SAMD3Q8N6K7 520 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 SLC35B4Q969S0 331 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 SYTL4Q96C24 671 aaPredicted RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 NUDT16Q96DE0 195 aaKnown RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 POLR3CQ9BUI4 534 aaPredicted RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 TRPV5Q9NQA5 729 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 MIS18AQ9NYP9 233 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 HDAC6Q9UBN7 1215 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 CNPY2Q9Y2B0 182 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 CPSF1Q10570 1443 aaKnown RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 USP54Q70EL1 1684 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 FAM208AQ9UK61 1670 aaKnown RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 BTAF1O14981 1849 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 FAM200BP0CF97 657 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 SESN3P58005 492 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 CUL4AQ13619 759 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 CCDC40Q4G0X9 1142 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 SYNE3Q6ZMZ3 975 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 TOM1L2Q6ZVM7 507 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 CCDC80Q76M96 950 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 C16orf71Q8IYS4 520 aaPredicted RBP9.78□□□□□ -0.84
SSB-205ENST00000422006 TRIM58Q8NG06 486 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 SCLT1Q96NL6 688 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms