RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 TTC6Q86TZ1 520 aa22.66■■□□□ 1.22
AC004540.1-203ENST00000421862 PANK1Q8TE04 598 aa22.66■■□□□ 1.22
AC004540.1-203ENST00000421862 APBA2Q99767 749 aa22.66■■□□□ 1.22
AC004540.1-203ENST00000421862 NBPF3Q9H094 633 aa22.66■■□□□ 1.22
AC004540.1-203ENST00000421862 ZKSCAN1P17029 563 aaPredicted RBP22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 VCAM1P19320 739 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 RGS2P41220 211 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 USP14P54578 494 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 GABPAQ06546 454 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 HSP90AB4PQ58FF6 505 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 RHPN1Q8TCX5 695 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 FEZ1Q99689 392 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 PAGR1Q9BTK6 254 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 RABGAP1Q9Y3P9 1069 aa22.65■■□□□ 1.22
AC004540.1-203ENST00000421862 USP17L15C9J2P7 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L13C9JLJ4 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L11C9JVI0 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L18D6R9N7 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L22D6RA61 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L17D6RBQ6 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L19D6RCP7 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L20D6RJB6 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 PLCD1P51178 756 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 USP17L24Q0WX57 530 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 TTF1Q15361 905 aaPredicted RBP22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 ABCB5Q2M3G0 1257 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 CERKLQ49MI3 558 aaPredicted RBP22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 PLEKHH3Q7Z736 793 aa22.64■■□□□ 1.21
AC004540.1-203ENST00000421862 PFASO15067 1338 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 PDE6AP16499 860 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 GUCY1A2P33402 732 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 CACNB2Q08289 660 aaPredicted RBP22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 ZYXQ15942 572 aaKnown RBP22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 CATSPERGQ6ZRH7 1159 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 MIER1Q8N108 512 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 GDF15Q99988 308 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 C11orf49Q9H6J7 331 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 IL1RAPL2Q9NP60 686 aa22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 COL11A1P12107 1806 aaPredicted RBP22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 GREB1LQ9C091 1923 aaPredicted RBP22.63■■□□□ 1.21
AC004540.1-203ENST00000421862 COL6A1P12109 1028 aa22.62■■□□□ 1.21
AC004540.1-203ENST00000421862 BMP8BP34820 402 aa22.62■■□□□ 1.21
AC004540.1-203ENST00000421862 RAB3GAP1Q15042 981 aa22.62■■□□□ 1.21
AC004540.1-203ENST00000421862 CCL14Q16627 93 aa22.62■■□□□ 1.21
AC004540.1-203ENST00000421862 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
AC004540.1-203ENST00000421862 MAGEB6P1A0A0J9YX57 407 aa22.61■■□□□ 1.21
AC004540.1-203ENST00000421862 TCRBV5S4A2TA0A5A2 114 aa22.61■■□□□ 1.21
AC004540.1-203ENST00000421862 MAP2K5Q13163 448 aa22.61■■□□□ 1.21
AC004540.1-203ENST00000421862 C7orf61Q8IZ16 206 aa22.61■■□□□ 1.21
AC004540.1-203ENST00000421862 STAP2Q9UGK3 403 aa22.61■■□□□ 1.21
AC004540.1-203ENST00000421862 LTBP2Q14767 1821 aa22.61■■□□□ 1.21
AC004540.1-203ENST00000421862 SPDYE16A6NNV3 312 aaPredicted RBP22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 SOX1O00570 391 aaPredicted RBP22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 CCNA1P78396 465 aa22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 SLC9C2Q5TAH2 1124 aa22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 LHX8Q68G74 356 aa22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 KIF1BPQ96EK5 621 aa22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 CRNKL1Q9BZJ0 848 aaKnown RBP22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 CABP5Q9NP86 173 aa22.6■■□□□ 1.21
AC004540.1-203ENST00000421862 ZNF532Q9HCE3 1301 aa22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 HOXC6P09630 235 aa22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 CCND3P30281 292 aaPredicted RBP22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 EVX2Q03828 476 aa22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 CCAR1Q8IX12 1150 aaKnown RBP22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 RPAP2Q8IXW5 612 aaPredicted RBP22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 CLASRPQ8N2M8 674 aaKnown RBP22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 BTBD7Q9P203 1132 aa22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 ZNFX1Q9P2E3 1918 aaKnown RBP22.59■■□□□ 1.21
AC004540.1-203ENST00000421862 DNAH12Q6ZR08 3092 aa22.58■■□□□ 1.21
AC004540.1-203ENST00000421862 MS4A1P11836 297 aa22.58■■□□□ 1.21
AC004540.1-203ENST00000421862 GRB14Q14449 540 aa22.58■■□□□ 1.21
AC004540.1-203ENST00000421862 SIRT2Q8IXJ6 389 aa22.58■■□□□ 1.21
AC004540.1-203ENST00000421862 LCORLQ8N3X6 602 aa22.58■■□□□ 1.21
AC004540.1-203ENST00000421862 RPAP3Q9H6T3 665 aaPredicted RBP22.58■■□□□ 1.21
AC004540.1-203ENST00000421862 DCP1AQ9NPI6 582 aaPredicted RBP22.58■■□□□ 1.21
AC004540.1-203ENST00000421862 COL6A3P12111 3177 aa22.58■■□□□ 1.2
AC004540.1-203ENST00000421862 PLXNA1Q9UIW2 1896 aa22.58■■□□□ 1.2
AC004540.1-203ENST00000421862 SLC15A5A6NIM6 579 aa22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 GLRX3O76003 335 aaKnown RBP22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 IGHA2P01877 340 aa22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 POLR3DP05423 398 aaPredicted RBP22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 PTPREP23469 700 aa22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 SEPT2Q15019 361 aa22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 ZBTB40Q9NUA8 1239 aa22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 MCM9Q9NXL9 1143 aa22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 FLRT1Q9NZU1 646 aa22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 ZMYND8Q9ULU4 1186 aaPredicted RBP22.57■■□□□ 1.2
AC004540.1-203ENST00000421862 A0A1W2PRG0 241 aa22.56■■□□□ 1.2
AC004540.1-203ENST00000421862 GOLIM4O00461 696 aa22.56■■□□□ 1.2
AC004540.1-203ENST00000421862 SDR42E1Q8WUS8 393 aa22.56■■□□□ 1.2
AC004540.1-203ENST00000421862 EDC3Q96F86 508 aaKnown RBP22.56■■□□□ 1.2
AC004540.1-203ENST00000421862 DNAJC2Q99543 621 aaKnown RBP22.56■■□□□ 1.2
AC004540.1-203ENST00000421862 DDX19BQ9UMR2 479 aa22.56■■□□□ 1.2
AC004540.1-203ENST00000421862 HMMRO75330 724 aa22.55■■□□□ 1.2
AC004540.1-203ENST00000421862 LRCH3Q96II8 777 aa22.55■■□□□ 1.2
AC004540.1-203ENST00000421862 IFIT2P09913 472 aaKnown RBP22.54■■□□□ 1.2
AC004540.1-203ENST00000421862 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
AC004540.1-203ENST00000421862 SWAP70Q9UH65 585 aa22.54■■□□□ 1.2
AC004540.1-203ENST00000421862 RAB11FIP3O75154 756 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms