RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 CTCFP49711 727 aaPredicted RBP22.98■■□□□ 1.27
GCDH-202ENST00000421816 PTH1RQ03431 593 aa22.98■■□□□ 1.27
GCDH-202ENST00000421816 ZNF444Q8N0Y2 327 aaPredicted RBP22.98■■□□□ 1.27
GCDH-202ENST00000421816 PROCA1Q8NCQ7 364 aaPredicted RBP22.98■■□□□ 1.27
GCDH-202ENST00000421816 NBPF3Q9H094 633 aa22.98■■□□□ 1.27
GCDH-202ENST00000421816 CTNNA3Q9UI47 895 aa22.98■■□□□ 1.27
GCDH-202ENST00000421816 HMGCS2P54868 508 aa22.97■■□□□ 1.27
GCDH-202ENST00000421816 MTMR2Q13614 643 aa22.97■■□□□ 1.27
GCDH-202ENST00000421816 SIAH1Q8IUQ4 282 aa22.97■■□□□ 1.27
GCDH-202ENST00000421816 ACER1Q8TDN7 264 aa22.97■■□□□ 1.27
GCDH-202ENST00000421816 INCENPQ9NQS7 918 aa22.97■■□□□ 1.27
GCDH-202ENST00000421816 ZNF213O14771 459 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 ORC4O43929 436 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 HAND2P61296 217 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 GADL1Q6ZQY3 521 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 KIAA1683Q9H0B3 1180 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 KANSL2Q9H9L4 492 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 TSKSQ9UJT2 592 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 PLIN4Q96Q06 1357 aa22.96■■□□□ 1.27
GCDH-202ENST00000421816 IGKV6D-41A0A0C4DH26 115 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 A0A1W2PRG0 241 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 TBC1D8O95759 1140 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 ICA1Q05084 483 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 DGKZQ13574 1117 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 TBC1D10CQ8IV04 446 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 NEDD1Q8NHV4 660 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 STAG1Q8WVM7 1258 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 MAP4K1Q92918 833 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 C12orf42Q96LP6 360 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 AGTPBP1Q9UPW5 1226 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 SLC45A1Q9Y2W3 748 aa22.95■■□□□ 1.26
GCDH-202ENST00000421816 PDHXO00330 501 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 PCP11498 1178 aaKnown RBP22.94■■□□□ 1.26
GCDH-202ENST00000421816 CRHR2Q13324 411 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 IMMTQ16891 758 aaKnown RBP22.94■■□□□ 1.26
GCDH-202ENST00000421816 AKNAD1Q5T1N1 836 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 TREML2Q5T2D2 321 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 USP17L2Q6R6M4 530 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 CASC1Q6TDU7 716 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 CLEC10AQ8IUN9 316 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 LSG1Q9H089 658 aaKnown RBP22.94■■□□□ 1.26
GCDH-202ENST00000421816 R3HDMLQ9H3Y0 253 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 EMILIN3Q9NT22 766 aa22.94■■□□□ 1.26
GCDH-202ENST00000421816 U3KPZ7 1027 aaPredicted RBP22.94■■□□□ 1.26
GCDH-202ENST00000421816 LBX1P52954 281 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 USP14P54578 494 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 TFAP4Q01664 338 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 TAF1CQ15572 869 aaPredicted RBP22.93■■□□□ 1.26
GCDH-202ENST00000421816 NOM1Q5C9Z4 860 aaKnown RBP22.93■■□□□ 1.26
GCDH-202ENST00000421816 FAM47AQ5JRC9 791 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 FEZ1Q99689 392 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 ARHGEF10LQ9HCE6 1279 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 TMOD4Q9NZQ9 345 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 TMX2Q9Y320 296 aa22.93■■□□□ 1.26
GCDH-202ENST00000421816 TSPY3P0CV98 308 aa22.92■■□□□ 1.26
GCDH-202ENST00000421816 TSPY8P0CW00 308 aa22.92■■□□□ 1.26
GCDH-202ENST00000421816 EEF2P13639 858 aaKnown RBP22.92■■□□□ 1.26
GCDH-202ENST00000421816 MFSD6Q6ZSS7 791 aa22.92■■□□□ 1.26
GCDH-202ENST00000421816 KIAA1211Q6ZU35 1233 aa22.92■■□□□ 1.26
GCDH-202ENST00000421816 RNF41Q9H4P4 317 aaPredicted RBP22.92■■□□□ 1.26
GCDH-202ENST00000421816 ZFYVE28Q9HCC9 887 aa22.92■■□□□ 1.26
GCDH-202ENST00000421816 NYAP2Q9P242 653 aa22.92■■□□□ 1.26
GCDH-202ENST00000421816 MYH4Q9Y623 1939 aa22.91■■□□□ 1.26
GCDH-202ENST00000421816 ADGRA2Q96PE1 1338 aa22.9■■□□□ 1.26
GCDH-202ENST00000421816 TSPY2A6NKD2 308 aa22.9■■□□□ 1.26
GCDH-202ENST00000421816 RANBP6O60518 1105 aaKnown RBP22.9■■□□□ 1.26
GCDH-202ENST00000421816 ZYXQ15942 572 aaKnown RBP22.9■■□□□ 1.26
GCDH-202ENST00000421816 CEP95Q96GE4 821 aa22.9■■□□□ 1.26
GCDH-202ENST00000421816 SH2D4AQ9H788 454 aa22.9■■□□□ 1.26
GCDH-202ENST00000421816 PRDM10Q9NQV6 1147 aa22.9■■□□□ 1.26
GCDH-202ENST00000421816 MTMR4Q9NYA4 1195 aa22.9■■□□□ 1.26
GCDH-202ENST00000421816 RBM8AQ9Y5S9 174 aaKnown RBP22.9■■□□□ 1.26
GCDH-202ENST00000421816 NEDD4P46934 1319 aa22.89■■□□□ 1.26
GCDH-202ENST00000421816 GPR25O00155 361 aa22.89■■□□□ 1.25
GCDH-202ENST00000421816 TLR2O60603 784 aa22.89■■□□□ 1.25
GCDH-202ENST00000421816 CYP21A2P08686 494 aa22.89■■□□□ 1.25
GCDH-202ENST00000421816 HOXA7P31268 230 aaPredicted RBP22.89■■□□□ 1.25
GCDH-202ENST00000421816 NT5C2P49902 561 aa22.89■■□□□ 1.25
GCDH-202ENST00000421816 PABPC4Q13310 644 aaKnown RBP eCLIP22.89■■□□□ 1.25
GCDH-202ENST00000421816 RRP12Q5JTH9 1297 aaKnown RBP22.89■■□□□ 1.25
GCDH-202ENST00000421816 PARK7Q99497 189 aaKnown RBP22.89■■□□□ 1.25
GCDH-202ENST00000421816 ANO2Q9NQ90 1003 aa22.89■■□□□ 1.25
GCDH-202ENST00000421816 TOMM22Q9NS69 142 aa22.89■■□□□ 1.25
GCDH-202ENST00000421816 NKX2-3Q8TAU0 364 aa22.88■■□□□ 1.25
GCDH-202ENST00000421816 MKL1Q969V6 931 aa22.88■■□□□ 1.25
GCDH-202ENST00000421816 VCPKMTQ9H867 229 aa22.88■■□□□ 1.25
GCDH-202ENST00000421816 IL17RBQ9NRM6 502 aa22.88■■□□□ 1.25
GCDH-202ENST00000421816 CYP2C8P10632 490 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 VCAM1P19320 739 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 NOVP48745 357 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 ATP2B2Q01814 1243 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 KIAA1755Q5JYT7 1200 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 TCP11L1Q9NUJ3 509 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 CLIP2Q9UDT6 1046 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 PNMA3Q9UL41 463 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 SYNPO2Q9UMS6 1093 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 CASP8AP2Q9UKL3 1982 aa22.87■■□□□ 1.25
GCDH-202ENST00000421816 TTLL1O95922 423 aa22.86■■□□□ 1.25
GCDH-202ENST00000421816 OSBPP22059 807 aa22.86■■□□□ 1.25
GCDH-202ENST00000421816 PPP4R3BQ5MIZ7 849 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms