RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 LPAR1Q92633 364 aa17.68■□□□□ 0.42
FAM3A-209ENST00000421517 ASCC2Q9H1I8 757 aaPredicted RBP17.68■□□□□ 0.42
FAM3A-209ENST00000421517 KANSL2Q9H9L4 492 aa17.68■□□□□ 0.42
FAM3A-209ENST00000421517 EPB41L4AQ9HCS5 686 aaPredicted RBP17.68■□□□□ 0.42
FAM3A-209ENST00000421517 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
FAM3A-209ENST00000421517 CPA4Q9UI42 421 aa17.68■□□□□ 0.42
FAM3A-209ENST00000421517 SYNPO2Q9UMS6 1093 aa17.68■□□□□ 0.42
FAM3A-209ENST00000421517 NT5C2P49902 561 aa17.67■□□□□ 0.42
FAM3A-209ENST00000421517 MFAP1P55081 439 aaKnown RBP17.67■□□□□ 0.42
FAM3A-209ENST00000421517 DYNLL2Q96FJ2 89 aa17.67■□□□□ 0.42
FAM3A-209ENST00000421517 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L15C9J2P7 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L13C9JLJ4 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L11C9JVI0 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L18D6R9N7 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L22D6RA61 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L17D6RBQ6 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L19D6RCP7 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L20D6RJB6 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 SLC3A2P08195 630 aaKnown RBP17.66■□□□□ 0.42
FAM3A-209ENST00000421517 TDO2P48775 406 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 FCGRTP55899 365 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 USP17L24Q0WX57 530 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 SEPT2Q15019 361 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 SHROOM1Q2M3G4 852 aaPredicted RBP17.66■□□□□ 0.42
FAM3A-209ENST00000421517 ARMC5Q96C12 935 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 NAPBQ9H115 298 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 ARHGEF10LQ9HCE6 1279 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 ANAPC4Q9UJX5 808 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 TMX2Q9Y320 296 aa17.66■□□□□ 0.42
FAM3A-209ENST00000421517 TRIM6-TRIM34B2RNG4 842 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 APPP05067 770 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 SDSP20132 328 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 PSMC4P43686 418 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
FAM3A-209ENST00000421517 CAP1Q01518 475 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 EVX2Q03828 476 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 PDE4BQ07343 736 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 SLC44A5Q8NCS7 719 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 FEZ1Q99689 392 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 SRRDQ9UH36 339 aa17.65■□□□□ 0.42
FAM3A-209ENST00000421517 CYP2D7A0A087X1C5 515 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 MPHOSPH10O00566 681 aaKnown RBP17.64■□□□□ 0.41
FAM3A-209ENST00000421517 FGRP09769 529 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 AKR1B1P15121 316 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 HERVK_113P62684 666 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 ICA1Q05084 483 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 NBPF11Q86T75 865 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 SIAH1Q8IUQ4 282 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 TRIM47Q96LD4 638 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 MYPNQ86TC9 1320 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 BAZ2AQ9UIF9 1905 aaKnown RBP17.64■□□□□ 0.41
FAM3A-209ENST00000421517 PLIN4Q96Q06 1357 aa17.64■□□□□ 0.41
FAM3A-209ENST00000421517 A0A1W2PRG0 241 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 CCDC85CA6NKD9 419 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 MINDY4BA8MYZ0 360 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 FOXP2O15409 715 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 PCP11498 1178 aaKnown RBP17.63■□□□□ 0.41
FAM3A-209ENST00000421517 VCAM1P19320 739 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 RASA1P20936 1047 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 IRF5Q13568 498 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 ACER1Q8TDN7 264 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 RILPL2Q969X0 211 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 NYAP2Q9P242 653 aa17.63■□□□□ 0.41
FAM3A-209ENST00000421517 HTTP42858 3142 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 FMNL1O95466 1100 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-209ENST00000421517 CAPN2P17655 700 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 CTGFP29279 349 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 PPARAQ07869 468 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 ZNF444Q8N0Y2 327 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-209ENST00000421517 ANKRD13CQ8N6S4 541 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 MKL1Q969V6 931 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 P2RX7Q99572 595 aaKnown RBP17.62■□□□□ 0.41
FAM3A-209ENST00000421517 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.62■□□□□ 0.41
FAM3A-209ENST00000421517 VCPKMTQ9H867 229 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 HOXC10Q9NYD6 342 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 RABGAP1Q9Y3P9 1069 aa17.62■□□□□ 0.41
FAM3A-209ENST00000421517 GREB1LQ9C091 1923 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-209ENST00000421517 IGKV6D-41A0A0C4DH26 115 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 A0A0D9SFI3 127 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 WDR46O15213 610 aaKnown RBP17.61■□□□□ 0.41
FAM3A-209ENST00000421517 PDE4AP27815 886 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-209ENST00000421517 TTC22Q5TAA0 569 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 GPRC5AQ8NFJ5 357 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 PXYLP1Q8TE99 480 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 COA7Q96BR5 231 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 FAM227BQ96M60 508 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 ARHGAP39Q9C0H5 1083 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 CCDC171Q6TFL3 1326 aa17.61■□□□□ 0.41
FAM3A-209ENST00000421517 SMIM22K7EJ46 135 aa17.6■□□□□ 0.41
FAM3A-209ENST00000421517 HSPD1P10809 573 aaKnown RBP17.6■□□□□ 0.41
FAM3A-209ENST00000421517 NMIQ13287 307 aaPredicted RBP17.6■□□□□ 0.41
FAM3A-209ENST00000421517 COG2Q14746 738 aa17.6■□□□□ 0.41
FAM3A-209ENST00000421517 MB21D1Q8N884 522 aa17.6■□□□□ 0.41
FAM3A-209ENST00000421517 NEDD1Q8NHV4 660 aa17.6■□□□□ 0.41
FAM3A-209ENST00000421517 GOPCQ9HD26 462 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms