RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 SEMA3EO15041 775 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 PQBP1O60828 265 aaKnown RBP11.3□□□□□ -0.6
TRIM39-206ENST00000420746 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-206ENST00000420746 ASNSP08243 561 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 FAAP100Q0VG06 881 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRIM39-206ENST00000420746 RALBP1Q15311 655 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
TRIM39-206ENST00000420746 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-206ENST00000420746 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 FERMT2Q96AC1 680 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 MTIF3Q9H2K0 278 aaKnown RBP11.3□□□□□ -0.6
TRIM39-206ENST00000420746 TBX21Q9UL17 535 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 DCDC2CA8MYV0 355 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 ST18O60284 1047 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 CNMDO75829 334 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 SLC5A1P13866 664 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 PICALMQ13492 652 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
TRIM39-206ENST00000420746 LBX2Q6XYB7 198 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 C16orf59Q7L2K0 433 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 LPIN2Q92539 896 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 NKX2-4Q9H2Z4 354 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
TRIM39-206ENST00000420746 NRBP1Q9UHY1 535 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 ZNF236Q9UL36 1845 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 PLXNA1Q9UIW2 1896 aa11.29□□□□□ -0.6
TRIM39-206ENST00000420746 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 ATAD5Q96QE3 1844 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 A0A1W2PQ45 241 aaPredicted RBP11.28□□□□□ -0.6
TRIM39-206ENST00000420746 A0A1W2PQY0 241 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 FAM196BA6NMK8 535 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
TRIM39-206ENST00000420746 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 RRP1BQ14684 758 aaKnown RBP11.28□□□□□ -0.6
TRIM39-206ENST00000420746 FAM47AQ5JRC9 791 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 RNF180Q86T96 592 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 MICALL1Q8N3F8 863 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 KAZALD1Q96I82 304 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
TRIM39-206ENST00000420746 DENND2AQ9ULE3 1009 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 MYH13Q9UKX3 1938 aa11.28□□□□□ -0.6
TRIM39-206ENST00000420746 MYO9BQ13459 2157 aa11.27□□□□□ -0.6
TRIM39-206ENST00000420746 STRNO43815 780 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
TRIM39-206ENST00000420746 ALADP13716 330 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 BTDP43251 543 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 RHBDL3P58872 404 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 WDR78Q5VTH9 848 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 ANO1Q5XXA6 986 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 DPP9Q86TI2 863 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 HLA-CQ95604 372 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 SUCLG2Q96I99 432 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 TSEN34Q9BSV6 310 aaKnown RBP11.27□□□□□ -0.61
TRIM39-206ENST00000420746 YBX2Q9Y2T7 364 aaKnown RBP11.27□□□□□ -0.61
TRIM39-206ENST00000420746 MTCH2Q9Y6C9 303 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 MROH7Q68CQ1 1323 aa11.27□□□□□ -0.61
TRIM39-206ENST00000420746 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 RARBP10826 455 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 ZNF365Q70YC5 407 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 DZIP1Q86YF9 867 aaKnown RBP11.26□□□□□ -0.61
TRIM39-206ENST00000420746 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 PDS5AQ29RF7 1337 aaKnown RBP11.26□□□□□ -0.61
TRIM39-206ENST00000420746 CFAP54Q96N23 3096 aa11.26□□□□□ -0.61
TRIM39-206ENST00000420746 USP34Q70CQ2 3546 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 CSF2RAP15509 400 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 ADORA2AP29274 412 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 CD320Q9NPF0 282 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 STARD7Q9NQZ5 370 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 PCDHA11Q9Y5I1 949 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 CACNA1FO60840 1977 aa11.25□□□□□ -0.61
TRIM39-206ENST00000420746 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
TRIM39-206ENST00000420746 F6X3S4 739 aa11.24□□□□□ -0.61
TRIM39-206ENST00000420746 APAF1O14727 1248 aa11.24□□□□□ -0.61
TRIM39-206ENST00000420746 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
TRIM39-206ENST00000420746 ABRAQ8N0Z2 381 aa11.24□□□□□ -0.61
TRIM39-206ENST00000420746 SHCBP1Q8NEM2 672 aa11.24□□□□□ -0.61
TRIM39-206ENST00000420746 TSR2Q969E8 191 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms