RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTPN18-204ENST00000420717 AGTPBP1Q9UPW5 1226 aa17.17■□□□□ 0.34
PTPN18-204ENST00000420717 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
PTPN18-204ENST00000420717 MTMR2Q13614 643 aa17.16■□□□□ 0.34
PTPN18-204ENST00000420717 SEPT2Q15019 361 aa17.16■□□□□ 0.34
PTPN18-204ENST00000420717 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
PTPN18-204ENST00000420717 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.16■□□□□ 0.34
PTPN18-204ENST00000420717 SYNPO2Q9UMS6 1093 aa17.16■□□□□ 0.34
PTPN18-204ENST00000420717 A0A0G2JMZ2 1700 aa17.16■□□□□ 0.34
PTPN18-204ENST00000420717 PARP14Q460N5 1801 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 USP14P54578 494 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 CRHR2Q13324 411 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 RAB3GAP1Q15042 981 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 MKNK2Q9HBH9 465 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 MYH4Q9Y623 1939 aa17.15■□□□□ 0.34
PTPN18-204ENST00000420717 PDHXO00330 501 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
PTPN18-204ENST00000420717 NOVP48745 357 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 HMGCS2P54868 508 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 ICA1Q05084 483 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 SIAH1Q8IUQ4 282 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 PARK7Q99497 189 aaKnown RBP17.14■□□□□ 0.33
PTPN18-204ENST00000420717 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 SH2D4AQ9H788 454 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 CTNNA3Q9UI47 895 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
PTPN18-204ENST00000420717 RLFQ13129 1914 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 MPHOSPH10O00566 681 aaKnown RBP17.13■□□□□ 0.33
PTPN18-204ENST00000420717 TLR2O60603 784 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 CDC45O75419 566 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 LBX1P52954 281 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
PTPN18-204ENST00000420717 TREML2Q5T2D2 321 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 ACER1Q8TDN7 264 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
PTPN18-204ENST00000420717 GPR25O00155 361 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 PRDM1O75626 825 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 TBC1D8O95759 1140 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 PABPC4Q13310 644 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPN18-204ENST00000420717 AKNAD1Q5T1N1 836 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 GADL1Q6ZQY3 521 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 TBC1D10CQ8IV04 446 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 LPAR1Q92633 364 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 R3HDMLQ9H3Y0 253 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 RNF41Q9H4P4 317 aaPredicted RBP17.12■□□□□ 0.33
PTPN18-204ENST00000420717 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 NYAP2Q9P242 653 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
PTPN18-204ENST00000420717 PPP4R3BQ5MIZ7 849 aa17.11■□□□□ 0.33
PTPN18-204ENST00000420717 ZNF444Q8N0Y2 327 aaPredicted RBP17.11■□□□□ 0.33
PTPN18-204ENST00000420717 MKL1Q969V6 931 aa17.11■□□□□ 0.33
PTPN18-204ENST00000420717 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
PTPN18-204ENST00000420717 MTMR4Q9NYA4 1195 aa17.11■□□□□ 0.33
PTPN18-204ENST00000420717 TSKSQ9UJT2 592 aa17.11■□□□□ 0.33
PTPN18-204ENST00000420717 CASP8AP2Q9UKL3 1982 aa17.11■□□□□ 0.33
PTPN18-204ENST00000420717 ZNF213O14771 459 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
PTPN18-204ENST00000420717 VCAM1P19320 739 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 PTH1RQ03431 593 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
PTPN18-204ENST00000420717 C17orf99Q6UX52 265 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 FEZ1Q99689 392 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 TCP11L1Q9NUJ3 509 aa17.1■□□□□ 0.33
PTPN18-204ENST00000420717 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
PTPN18-204ENST00000420717 TSPY3P0CV98 308 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 TSPY8P0CW00 308 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 BCRP11274 1271 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 HAND2P61296 217 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 TFAP4Q01664 338 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 DGKZQ13574 1117 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 LBX2Q6XYB7 198 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 MFSD6Q6ZSS7 791 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 ZNF296Q8WUU4 475 aaPredicted RBP17.09■□□□□ 0.33
PTPN18-204ENST00000420717 CEP95Q96GE4 821 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 NEDD4P46934 1319 aa17.09■□□□□ 0.33
PTPN18-204ENST00000420717 TTLL1O95922 423 aa17.08■□□□□ 0.32
PTPN18-204ENST00000420717 GCLCP48506 637 aaPredicted RBP17.08■□□□□ 0.32
PTPN18-204ENST00000420717 GTF3C2Q8WUA4 911 aaPredicted RBP17.08■□□□□ 0.32
PTPN18-204ENST00000420717 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
PTPN18-204ENST00000420717 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.32
PTPN18-204ENST00000420717 MGAMO43451 1857 aa17.07■□□□□ 0.32
PTPN18-204ENST00000420717 MYPNQ86TC9 1320 aa17.07■□□□□ 0.32
PTPN18-204ENST00000420717 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
PTPN18-204ENST00000420717 WDR46O15213 610 aaKnown RBP17.07■□□□□ 0.32
PTPN18-204ENST00000420717 FKTNO75072 461 aa17.07■□□□□ 0.32
PTPN18-204ENST00000420717 CYP21A2P08686 494 aa17.07■□□□□ 0.32
PTPN18-204ENST00000420717 CYP2C8P10632 490 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms