RNA–Protein interactions for RNA: ENST00000419680.6

CYTOR-208, cytoskeleton regulator RNA, humanhuman

TSL 5 BASIC

Gene CYTOR, Length 675 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTOR-208ENST00000419680 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 MPHOSPH10O00566 681 aaKnown RBP13.19□□□□□ -0.3
CYTOR-208ENST00000419680 GPAA1O43292 621 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 CDK8P49336 464 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 SLFNL1Q499Z3 407 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 CTR9Q6PD62 1173 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 RAET1EQ8TD07 263 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
CYTOR-208ENST00000419680 TMEM106CQ9BVX2 250 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 ARHGAP39Q9C0H5 1083 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 MORF4L1Q9UBU8 362 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 PTCH2Q9Y6C5 1203 aa13.19□□□□□ -0.3
CYTOR-208ENST00000419680 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 APPP05067 770 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
CYTOR-208ENST00000419680 CAPN2P17655 700 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 SEPT2Q15019 361 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 ANKRD13CQ8N6S4 541 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
CYTOR-208ENST00000419680 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
CYTOR-208ENST00000419680 CHGBP05060 677 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 CYP2D6P10635 497 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
CYTOR-208ENST00000419680 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 TDO2P48775 406 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 SOX10P56693 466 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 HERVK_113P62684 666 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 CAP1Q01518 475 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 NUCB1Q02818 461 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 IRF5Q13568 498 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 CATSPERGQ6ZRH7 1159 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 LPAR1Q92633 364 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 P2RX7Q99572 595 aaKnown RBP13.17□□□□□ -0.3
CYTOR-208ENST00000419680 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 KANSL2Q9H9L4 492 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
CYTOR-208ENST00000419680 RBBP6Q7Z6E9 1792 aaKnown RBP13.17□□□□□ -0.3
CYTOR-208ENST00000419680 MINDY4BA8MYZ0 360 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 IGHDP01880 384 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 UBXN2AP68543 259 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 CCNA1P78396 465 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
CYTOR-208ENST00000419680 B4GALNT3Q6L9W6 998 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 LBX2Q6XYB7 198 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 ZNF333Q96JL9 665 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 HOXC10Q9NYD6 342 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 DOCK3Q8IZD9 2030 aa13.16□□□□□ -0.3
CYTOR-208ENST00000419680 M0R2C6 588 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 AKR1B1P15121 316 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 VCAM1P19320 739 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 CTGFP29279 349 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 MAPK4P31152 587 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 GRK4P32298 578 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 MFAP1P55081 439 aaKnown RBP13.15□□□□□ -0.3
CYTOR-208ENST00000419680 ICA1Q05084 483 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 PDE4BQ07343 736 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
CYTOR-208ENST00000419680 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
CYTOR-208ENST00000419680 SLC44A5Q8NCS7 719 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 NAPBQ9H115 298 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
CYTOR-208ENST00000419680 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 TRIM6-TRIM34B2RNG4 842 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 HIP1O00291 1037 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 PRKCZQ05513 592 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 COG2Q14746 738 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
CYTOR-208ENST00000419680 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 RBPJLQ9UBG7 517 aa13.14□□□□□ -0.31
CYTOR-208ENST00000419680 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
CYTOR-208ENST00000419680 ADCY3O60266 1144 aa13.13□□□□□ -0.31
CYTOR-208ENST00000419680 FLT3LGP49771 235 aa13.13□□□□□ -0.31
CYTOR-208ENST00000419680 ERVK-9P63128 1117 aa13.13□□□□□ -0.31
CYTOR-208ENST00000419680 ERVK-24P63145 666 aa13.13□□□□□ -0.31
CYTOR-208ENST00000419680 ALX1Q15699 326 aa13.13□□□□□ -0.31
CYTOR-208ENST00000419680 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms