RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 PGAP2Q9UHJ9 254 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 DDTLA6NHG4 134 aaPredicted RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 H3BQV1 296 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 F13A1P00488 732 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 GRM4Q14833 912 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 NFKBIBQ15653 356 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 NBPF11Q86T75 865 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 CSRNP1Q96S65 589 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 TMEM47Q9BQJ4 181 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 CABP5Q9NP86 173 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 SH3GLB2Q9NR46 395 aa11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 NAP1L2Q9ULW6 460 aaPredicted RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 BAZ2AQ9UIF9 1905 aaKnown RBP11.75□□□□□ -0.53
HMGA1P6-201ENST00000418454 MYH1P12882 1939 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 hCG_1984214I3L0E3 225 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 BAG4O95429 457 aaKnown RBP11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 CDC27P30260 824 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 AKAP17AQ02040 695 aaKnown RBP11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 FUT2Q10981 343 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 GPATCH4Q5T3I0 446 aaKnown RBP11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 TMTC3Q6ZXV5 915 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZFPM1Q8IX07 1006 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZNF713Q8N859 430 aaPredicted RBP11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 ADARB2Q9NS39 739 aaKnown RBP11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 CFAP45Q9UL16 551 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
HMGA1P6-201ENST00000418454 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 JAK2O60674 1132 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 TCP10Q12799 353 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 TRIM29Q14134 588 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 ABCB5Q2M3G0 1257 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 KIF4BQ2VIQ3 1234 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 DCAF15Q66K64 600 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 GALNT17Q6IS24 598 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 TMEM87AQ8NBN3 555 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 GMCL1P1Q8NEA9 526 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 CEP95Q96GE4 821 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 C8orf76Q96K31 380 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 SPZ1Q9BXG8 430 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 SENP2Q9HC62 589 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 STX8Q9UNK0 236 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 GJA3Q9Y6H8 435 aa11.73□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 AKR1B1P15121 316 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 TRAF1Q13077 416 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 NBPF9Q3BBW0 867 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 SUPT20HL1Q3ZLR7 823 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 USP50Q70EL3 339 aaPredicted RBP11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 NUP133Q8WUM0 1156 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 SCAND2PQ9GZW5 306 aaPredicted RBP11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 SH2D4AQ9H788 454 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 PCDHAC2Q9Y5I4 1007 aa11.72□□□□□ -0.53
HMGA1P6-201ENST00000418454 ELP1O95163 1332 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 SOCS7O14512 581 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 PLA2G6O60733 806 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 ASNSP08243 561 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 PARP1P09874 1014 aaKnown RBP11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 CACNB3P54284 484 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 EVX2Q03828 476 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 PKP1Q13835 747 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 RASA3Q14644 834 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 SAFBQ15424 915 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 C9orf131Q5VYM1 1079 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 GMCL1Q96IK5 515 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 TEPSINQ96N21 525 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 ALG1Q9BT22 464 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 DEFB129Q9H1M3 183 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms