RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 PAG1Q9NWQ8 432 aa17.1■□□□□ 0.33
LINC01006-202ENST00000418309 RBPJLQ9UBG7 517 aa17.1■□□□□ 0.33
LINC01006-202ENST00000418309 COLQQ9Y215 455 aaPredicted RBP17.1■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 MPHOSPH10O00566 681 aaKnown RBP17.09■□□□□ 0.33
LINC01006-202ENST00000418309 CAPN2P17655 700 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 MAPK4P31152 587 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 SHMT1P34896 483 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 ERVK-9P63128 1117 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 ERVK-24P63145 666 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 Q3C1V9 767 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 C20orf194Q5TEA3 1177 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 LCORLQ8N3X6 602 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■■ 39.4
LINC01006-202ENST00000418309 HMX1Q9NP08 348 aaPredicted RBP17.09■□□□□ 0.33
LINC01006-202ENST00000418309 PAK6Q9NQU5 681 aaPredicted RBP17.09■□□□□ 0.33
LINC01006-202ENST00000418309 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
LINC01006-202ENST00000418309 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 ATP5JP18859 108 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 TRIM32Q13049 653 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 ACER1Q8TDN7 264 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC01006-202ENST00000418309 KIAA1683Q9H0B3 1180 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 ARMT1Q9H993 441 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 NR2E3Q9Y5X4 410 aa17.08■□□□□ 0.32
LINC01006-202ENST00000418309 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
LINC01006-202ENST00000418309 RPTORQ8N122 1335 aa17.07■□□□□ 0.32
LINC01006-202ENST00000418309 SEPT2Q15019 361 aa17.07■□□□□ 0.32
LINC01006-202ENST00000418309 SOCS4Q8WXH5 440 aa17.07■□□□□ 0.32
LINC01006-202ENST00000418309 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
LINC01006-202ENST00000418309 PORCNQ9H237 461 aa17.07■□□□□ 0.32
LINC01006-202ENST00000418309 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
LINC01006-202ENST00000418309 SMARCA5O60264 1052 aaPredicted RBP17.06■□□□□ 0.32
LINC01006-202ENST00000418309 MBD4O95243 580 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 CYP2D6P10635 497 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 VCAM1P19320 739 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 ADD2P35612 726 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 EVX2Q03828 476 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 GABPAQ06546 454 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 SLFNL1Q499Z3 407 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 CHRDL2Q6WN34 429 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 CATSPERGQ6ZRH7 1159 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 GPR142Q7Z601 462 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 PLEKHH3Q7Z736 793 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 TRIB2Q92519 343 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 HAUS7Q99871 368 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 CRISPLD2Q9H0B8 497 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 RABGAP1Q9Y3P9 1069 aa17.06■□□□□ 0.32
LINC01006-202ENST00000418309 PLXNB2O15031 1838 aa17.05■□□□□ 0.32
LINC01006-202ENST00000418309 PRKAB2O43741 272 aa17.05■□□□□ 0.32
LINC01006-202ENST00000418309 EVI5O60447 810 aa17.05■□□□□ 0.32
LINC01006-202ENST00000418309 XRCC5P13010 732 aaKnown RBP17.05■□□□□ 0.32
LINC01006-202ENST00000418309 GUCY1A2P33402 732 aa17.05■□□□□ 0.32
LINC01006-202ENST00000418309 CCNA1P78396 465 aa17.05■□□□□ 0.32
LINC01006-202ENST00000418309 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
LINC01006-202ENST00000418309 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
LINC01006-202ENST00000418309 ATP8A2Q9NTI2 1148 aa17.05■□□□□ 0.32
LINC01006-202ENST00000418309 CEP290O15078 2479 aa17.05■□□□□ 0.32
LINC01006-202ENST00000418309 GLRX3O76003 335 aaKnown RBP17.04■□□□□ 0.32
LINC01006-202ENST00000418309 ZKSCAN1P17029 563 aaPredicted RBP17.04■□□□□ 0.32
LINC01006-202ENST00000418309 RGS2P41220 211 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 NECAB2Q7Z6G3 386 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 TRMT44Q8IYL2 757 aaKnown RBP17.04■□□□□ 0.32
LINC01006-202ENST00000418309 SLC44A5Q8NCS7 719 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 DYNLL2Q96FJ2 89 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 DDRGK1Q96HY6 314 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 SWAP70Q9UH65 585 aa17.04■□□□□ 0.32
LINC01006-202ENST00000418309 CNMDO75829 334 aa17.03■□□□□ 0.32
LINC01006-202ENST00000418309 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
LINC01006-202ENST00000418309 MORN1Q5T089 497 aa17.03■□□□□ 0.32
LINC01006-202ENST00000418309 ZSCAN25Q6NSZ9 544 aa17.03■□□□□ 0.32
LINC01006-202ENST00000418309 TMEM179Q6ZVK1 233 aa17.03■□□□□ 0.32
LINC01006-202ENST00000418309 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
LINC01006-202ENST00000418309 CHGBP05060 677 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 FXR1P51114 621 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC01006-202ENST00000418309 UBE3CQ15386 1083 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 CCL14Q16627 93 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 ANKLE1Q8NAG6 615 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 DIS3LQ8TF46 1054 aaKnown RBP17.02■□□□□ 0.32
LINC01006-202ENST00000418309 USP6NLQ92738 828 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 TANGO6Q9C0B7 1094 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 SLC4A4Q9Y6R1 1079 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 IVNS1ABPQ9Y6Y0 642 aa17.02■□□□□ 0.32
LINC01006-202ENST00000418309 BAZ2AQ9UIF9 1905 aaKnown RBP17.02■□□□□ 0.31
LINC01006-202ENST00000418309 CYP2D7A0A087X1C5 515 aa17.01■□□□□ 0.31
LINC01006-202ENST00000418309 A0A1W2PRG0 241 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms