RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 HELLSQ9NRZ9 838 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 KIAA0100Q14667 2235 aaKnown RBP13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L15C9J2P7 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L11C9JVI0 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L18D6R9N7 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L22D6RA61 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L19D6RCP7 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L20D6RJB6 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 CDK8P49336 464 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 PDE4BQ07343 736 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 USP17L24Q0WX57 530 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 TREML2Q5T2D2 321 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 RAET1EQ8TD07 263 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 NAPBQ9H115 298 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 DOCK3Q8IZD9 2030 aa13.08□□□□□ -0.32
SNRNP25-204ENST00000417493 GSG1L2A8MUP6 293 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 ICA1Q05084 483 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 SEPT2Q15019 361 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 LPAR1Q92633 364 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 RILPL2Q969X0 211 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 KANSL2Q9H9L4 492 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 SRRDQ9UH36 339 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
SNRNP25-204ENST00000417493 M0R2C6 588 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 IGHDP01880 384 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 CYP2D6P10635 497 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 HERVK_113P62684 666 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 CCNA1P78396 465 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 ANKRD13CQ8N6S4 541 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 ARMC5Q96C12 935 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 TRIM47Q96LD4 638 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 CWC22Q9HCG8 908 aaKnown RBP13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 GOPCQ9HD26 462 aa13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
SNRNP25-204ENST00000417493 RGS19P49795 217 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 UBXN2AP68543 259 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 JAG1P78504 1218 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 GPRC5AQ8NFJ5 357 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 DIAPH3Q9NSV4 1193 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 HOXC10Q9NYD6 342 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
SNRNP25-204ENST00000417493 CHGBP05060 677 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 AKR1B1P15121 316 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 CAPN2P17655 700 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 VCAM1P19320 739 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 MAPK4P31152 587 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 MLLT1Q03111 559 aaPredicted RBP13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 SLAIN1Q8ND83 568 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 BIN2Q9UBW5 565 aaPredicted RBP13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 SYNPO2Q9UMS6 1093 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 PTCH2Q9Y6C5 1203 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 ZSWIM8A7E2V4 1837 aa13.04□□□□□ -0.32
SNRNP25-204ENST00000417493 CYP2D7A0A087X1C5 515 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 GRK4P32298 578 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 NT5C2P49902 561 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 ATP2B2Q01814 1243 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 IRF5Q13568 498 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 COG2Q14746 738 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 ALX1Q15699 326 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 MB21D1Q8N884 522 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 ACER1Q8TDN7 264 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 SOCS4Q8WXH5 440 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 P2RX7Q99572 595 aaKnown RBP13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 ARHGAP39Q9C0H5 1083 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 RPAP3Q9H6T3 665 aaPredicted RBP13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 VCPKMTQ9H867 229 aa13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 GREB1LQ9C091 1923 aaPredicted RBP13.03□□□□□ -0.32
SNRNP25-204ENST00000417493 PDE4DIPQ5VU43 2346 aa13.02□□□□□ -0.32
SNRNP25-204ENST00000417493 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 SOX10P56693 466 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms