RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 NEUROD6Q96NK8 337 aa21.93■■□□□ 1.1
VCP-202ENST00000417448 CHMP4BQ9H444 224 aaKnown RBP21.93■■□□□ 1.1
VCP-202ENST00000417448 PRKAG2Q9UGJ0 569 aa21.93■■□□□ 1.1
VCP-202ENST00000417448 C19orf81C9J6K1 198 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 DNM1LO00429 736 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 CNMDO75829 334 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 MAP4K4O95819 1239 aaPredicted RBP21.92■■□□□ 1.1
VCP-202ENST00000417448 FOSL2P15408 326 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 COL9A1P20849 921 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 TRPV1Q8NER1 839 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 SH3RF3Q8TEJ3 882 aaPredicted RBP21.92■■□□□ 1.1
VCP-202ENST00000417448 XAGE2Q96GT9 111 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 EMILIN3Q9NT22 766 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 HMG20BQ9P0W2 317 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 ATP11BQ9Y2G3 1177 aa21.92■■□□□ 1.1
VCP-202ENST00000417448 NOP58Q9Y2X3 529 aaKnown RBP21.92■■□□□ 1.1
VCP-202ENST00000417448 A0A1B0GUL7 405 aa21.91■■□□□ 1.1
VCP-202ENST00000417448 USP17L10C9JJH3 530 aa21.91■■□□□ 1.1
VCP-202ENST00000417448 GDF11O95390 407 aa21.91■■□□□ 1.1
VCP-202ENST00000417448 SMAD3P84022 425 aaKnown RBP21.91■■□□□ 1.1
VCP-202ENST00000417448 TEX11Q8IYF3 940 aa21.91■■□□□ 1.1
VCP-202ENST00000417448 BADQ92934 168 aa21.91■■□□□ 1.1
VCP-202ENST00000417448 EDC3Q96F86 508 aaKnown RBP21.91■■□□□ 1.1
VCP-202ENST00000417448 PI4KBQ9UBF8 816 aa21.91■■□□□ 1.1
VCP-202ENST00000417448 RAPGEFL1Q9UHV5 662 aa21.91■■□□□ 1.1
VCP-202ENST00000417448 MFSD14CQ5VZR4 134 aa21.9■■□□□ 1.1
VCP-202ENST00000417448 SYMPKQ92797 1274 aaKnown RBP21.9■■□□□ 1.1
VCP-202ENST00000417448 CNGA1P29973 690 aa21.89■■□□□ 1.09
VCP-202ENST00000417448 CYP2C19P33261 490 aa21.89■■□□□ 1.09
VCP-202ENST00000417448 GJC2Q5T442 439 aaPredicted RBP21.89■■□□□ 1.09
VCP-202ENST00000417448 METTL16Q86W50 562 aaKnown RBP21.89■■□□□ 1.09
VCP-202ENST00000417448 USP38Q8NB14 1042 aa21.89■■□□□ 1.09
VCP-202ENST00000417448 GTF3C2Q8WUA4 911 aaPredicted RBP21.89■■□□□ 1.09
VCP-202ENST00000417448 IL1RAPL2Q9NP60 686 aa21.89■■□□□ 1.09
VCP-202ENST00000417448 PRDM5Q9NQX1 630 aaPredicted RBP21.89■■□□□ 1.09
VCP-202ENST00000417448 ZBTB21Q9ULJ3 1066 aa21.89■■□□□ 1.09
VCP-202ENST00000417448 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
VCP-202ENST00000417448 MSCO60682 206 aa21.88■■□□□ 1.09
VCP-202ENST00000417448 HMMRO75330 724 aa21.88■■□□□ 1.09
VCP-202ENST00000417448 IGHA2P01877 340 aa21.88■■□□□ 1.09
VCP-202ENST00000417448 LDHCP07864 332 aa21.88■■□□□ 1.09
VCP-202ENST00000417448 GSTO1P78417 241 aa21.88■■□□□ 1.09
VCP-202ENST00000417448 SLC39A5Q6ZMH5 540 aa21.88■■□□□ 1.09
VCP-202ENST00000417448 NPLOC4Q8TAT6 608 aa21.88■■□□□ 1.09
VCP-202ENST00000417448 PTPREP23469 700 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 SNX17Q15036 470 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 TNNI3KQ59H18 835 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 SH3RF1Q7Z6J0 888 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 SPATA5Q8NB90 893 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 CCDC8Q9H0W5 538 aaPredicted RBP21.87■■□□□ 1.09
VCP-202ENST00000417448 DHX36Q9H2U1 1008 aaKnown RBP21.87■■□□□ 1.09
VCP-202ENST00000417448 CWC22Q9HCG8 908 aaKnown RBP21.87■■□□□ 1.09
VCP-202ENST00000417448 PDLIM7Q9NR12 457 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 RAI14Q9P0K7 980 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 AKAP2Q9Y2D5 859 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 RABGAP1Q9Y3P9 1069 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 FPGT-TNNI3KV9GXZ4 949 aa21.87■■□□□ 1.09
VCP-202ENST00000417448 TRIM43BA6NCK2 446 aa21.86■■□□□ 1.09
VCP-202ENST00000417448 SLC15A5A6NIM6 579 aa21.86■■□□□ 1.09
VCP-202ENST00000417448 HOXC6P09630 235 aa21.86■■□□□ 1.09
VCP-202ENST00000417448 CYBAP13498 195 aa21.86■■□□□ 1.09
VCP-202ENST00000417448 TRIM60Q495X7 471 aa21.86■■□□□ 1.09
VCP-202ENST00000417448 WDR78Q5VTH9 848 aa21.86■■□□□ 1.09
VCP-202ENST00000417448 TRIM43Q96BQ3 446 aaPredicted RBP21.86■■□□□ 1.09
VCP-202ENST00000417448 DBNDD2Q9BQY9 259 aa21.86■■□□□ 1.09
VCP-202ENST00000417448 TLR7Q9NYK1 1049 aaKnown RBP21.86■■□□□ 1.09
VCP-202ENST00000417448 ZNF236Q9UL36 1845 aa21.85■■□□□ 1.09
VCP-202ENST00000417448 FLT1P17948 1338 aa21.85■■□□□ 1.09
VCP-202ENST00000417448 SMARCA5O60264 1052 aaPredicted RBP21.85■■□□□ 1.09
VCP-202ENST00000417448 GRB14Q14449 540 aa21.85■■□□□ 1.09
VCP-202ENST00000417448 TJAP1Q5JTD0 557 aa21.85■■□□□ 1.09
VCP-202ENST00000417448 ANO1Q5XXA6 986 aa21.85■■□□□ 1.09
VCP-202ENST00000417448 MAPKAPK5Q8IW41 473 aa21.85■■□□□ 1.09
VCP-202ENST00000417448 RHPN1Q8TCX5 695 aa21.85■■□□□ 1.09
VCP-202ENST00000417448 EAF2Q96CJ1 260 aaPredicted RBP21.85■■□□□ 1.09
VCP-202ENST00000417448 AATFQ9NY61 560 aaKnown RBP eCLIP21.85■■□□□ 1.09
VCP-202ENST00000417448 TNFRSF10AO00220 468 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 ITGB8P26012 769 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 ATP2B2Q01814 1243 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 GORABQ5T7V8 394 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 USP17L2Q6R6M4 530 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 TGFBRAP1Q8WUH2 860 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 C12orf42Q96LP6 360 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 BTBD7Q9P203 1132 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 PALD1Q9ULE6 856 aa21.84■■□□□ 1.09
VCP-202ENST00000417448 MYH1P12882 1939 aa21.83■■□□□ 1.09
VCP-202ENST00000417448 GLRX3O76003 335 aaKnown RBP21.83■■□□□ 1.09
VCP-202ENST00000417448 MCAMP43121 646 aa21.83■■□□□ 1.09
VCP-202ENST00000417448 EPHB4P54760 987 aa21.83■■□□□ 1.09
VCP-202ENST00000417448 CCNA1P78396 465 aa21.83■■□□□ 1.09
VCP-202ENST00000417448 GRIN2CQ14957 1233 aa21.83■■□□□ 1.09
VCP-202ENST00000417448 ZYXQ15942 572 aaKnown RBP21.83■■□□□ 1.09
VCP-202ENST00000417448 ADGRA1Q86SQ6 560 aa21.83■■□□□ 1.09
VCP-202ENST00000417448 CRACR2BQ8N4Y2 399 aaPredicted RBP21.83■■□□□ 1.09
VCP-202ENST00000417448 GINM1Q9NU53 330 aa21.83■■□□□ 1.09
VCP-202ENST00000417448 NCOR1O75376 2440 aa21.82■■□□□ 1.08
VCP-202ENST00000417448 ARID4AP29374 1257 aaPredicted RBP21.82■■□□□ 1.08
VCP-202ENST00000417448 FOXP4Q8IVH2 680 aaPredicted RBP21.82■■□□□ 1.08
VCP-202ENST00000417448 BDP1A6H8Y1 2624 aa21.82■■□□□ 1.08
VCP-202ENST00000417448 TMEM265A0A087WTH1 108 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms