RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 USP17L1Q7RTZ2 530 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 PSMD1Q99460 953 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 DDX4Q9NQI0 724 aaKnown RBP22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 MMP1P03956 469 aa22.27■■□□□ 1.16
RAB3IP-205ENST00000417413 TSPY3P0CV98 308 aa22.27■■□□□ 1.16
RAB3IP-205ENST00000417413 TSPY8P0CW00 308 aa22.27■■□□□ 1.16
RAB3IP-205ENST00000417413 CRKP46108 304 aa22.27■■□□□ 1.16
RAB3IP-205ENST00000417413 LINC00301Q8NCQ3 95 aa22.27■■□□□ 1.16
RAB3IP-205ENST00000417413 YEATS4O95619 227 aa22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 HDLBPQ00341 1268 aaKnown RBP22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 SRBD1Q8N5C6 995 aaKnown RBP22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 CTCFLQ8NI51 663 aaPredicted RBP22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 ZDHHC15Q96MV8 337 aa22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 MAP3K14Q99558 947 aa22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 TSPY26PQ9H489 355 aa22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 KAT14Q9H8E8 782 aa22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 CNTNAP5Q8WYK1 1306 aa22.26■■□□□ 1.15
RAB3IP-205ENST00000417413 GABPAQ06546 454 aa22.25■■□□□ 1.15
RAB3IP-205ENST00000417413 PICALMQ13492 652 aa22.25■■□□□ 1.15
RAB3IP-205ENST00000417413 NEDD1Q8NHV4 660 aa22.25■■□□□ 1.15
RAB3IP-205ENST00000417413 BICD2Q8TD16 824 aa22.25■■□□□ 1.15
RAB3IP-205ENST00000417413 SHISA4Q96DD7 197 aa22.25■■□□□ 1.15
RAB3IP-205ENST00000417413 DACT1Q9NYF0 836 aa22.25■■□□□ 1.15
RAB3IP-205ENST00000417413 ANO1Q5XXA6 986 aa22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 PNMA1Q8ND90 353 aa22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 DDX19AQ9NUU7 478 aaKnown RBP22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 TAOK2Q9UL54 1235 aa22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 KCNJ14Q9UNX9 436 aa22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 V9GY48 417 aaPredicted RBP22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 AKAP17AQ02040 695 aaKnown RBP22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 KIAA0825Q8IV33 1275 aa22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 FUCA2Q9BTY2 467 aa22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 PCDHA7Q9UN72 937 aa22.24■■□□□ 1.15
RAB3IP-205ENST00000417413 YDJCA8MPS7 323 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 BTBD18B2RXH4 712 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 PPIP5K2O43314 1243 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 NR1I2O75469 434 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 NOVP48745 357 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 STK38Q15208 465 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 DIS3L2Q8IYB7 885 aaKnown RBP22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 KCNG4Q8TDN1 519 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 OSBPL5Q9H0X9 879 aaPredicted RBP22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 NUP62CLQ9H1M0 184 aa22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 FOXP1Q9H334 677 aaPredicted RBP22.23■■□□□ 1.15
RAB3IP-205ENST00000417413 SIPA1L1O43166 1804 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 KIF5BP33176 963 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 ME1P48163 572 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 GNL2Q13823 731 aaKnown RBP22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 GRM4Q14833 912 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 SAFBQ15424 915 aaKnown RBP eCLIP22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 NOSTRINQ8IVI9 506 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 CCAR1Q8IX12 1150 aaKnown RBP22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 TMEM47Q9BQJ4 181 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 GOLPH3LQ9H4A5 285 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 CLSTN2Q9H4D0 955 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 PCDHAC2Q9Y5I4 1007 aa22.22■■□□□ 1.15
RAB3IP-205ENST00000417413 SPTLC2O15270 562 aa22.21■■□□□ 1.15
RAB3IP-205ENST00000417413 SLC39A14Q15043 492 aa22.21■■□□□ 1.15
RAB3IP-205ENST00000417413 ADALQ6DHV7 355 aa22.21■■□□□ 1.15
RAB3IP-205ENST00000417413 PLIN4Q96Q06 1357 aa22.21■■□□□ 1.15
RAB3IP-205ENST00000417413 A0A1W2PQ27 194 aa22.2■■□□□ 1.15
RAB3IP-205ENST00000417413 A0A1W2PQ64 194 aa22.2■■□□□ 1.15
RAB3IP-205ENST00000417413 A0A1W2PQD8 194 aa22.2■■□□□ 1.15
RAB3IP-205ENST00000417413 hCG_1642624A0A1W2PR95 340 aa22.2■■□□□ 1.15
RAB3IP-205ENST00000417413 PHF20Q9BVI0 1012 aa22.2■■□□□ 1.15
RAB3IP-205ENST00000417413 SERPINA10Q9UK55 444 aa22.2■■□□□ 1.15
RAB3IP-205ENST00000417413 GREB1LQ9C091 1923 aaPredicted RBP22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 NFIAQ12857 509 aa22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 PTPAQ15257 358 aa22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 SF3A1Q15459 793 aaKnown RBP22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 RBM43Q6ZSC3 357 aaKnown RBP22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 ENGASEQ8NFI3 743 aa22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 VPS54Q9P1Q0 977 aa22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 MAD2L2Q9UI95 211 aa22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 BCS1LQ9Y276 419 aa22.2■■□□□ 1.14
RAB3IP-205ENST00000417413 COL4A5P29400 1685 aa22.19■■□□□ 1.14
RAB3IP-205ENST00000417413 BRCA1P38398 1863 aaKnown RBP22.19■■□□□ 1.14
RAB3IP-205ENST00000417413 MYO3BQ8WXR4 1341 aa22.19■■□□□ 1.14
RAB3IP-205ENST00000417413 XBP1P17861 261 aa22.19■■□□□ 1.14
RAB3IP-205ENST00000417413 SNW1Q13573 536 aaKnown RBP22.19■■□□□ 1.14
RAB3IP-205ENST00000417413 STAG2Q8N3U4 1231 aa22.19■■□□□ 1.14
RAB3IP-205ENST00000417413 OXER1Q8TDS5 423 aa22.19■■□□□ 1.14
RAB3IP-205ENST00000417413 BAZ2BQ9UIF8 2168 aaKnown RBP22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 CAMK4Q16566 473 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 MAP3K11Q16584 847 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 LARGE2Q8N3Y3 721 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 CEP95Q96GE4 821 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 IDI2Q9BXS1 227 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 TAOK3Q9H2K8 898 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 TNMDQ9H2S6 317 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 SWAP70Q9UH65 585 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 SERPINB13Q9UIV8 391 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 STX8Q9UNK0 236 aa22.18■■□□□ 1.14
RAB3IP-205ENST00000417413 PALM3A6NDB9 673 aaPredicted RBP22.17■■□□□ 1.14
RAB3IP-205ENST00000417413 GNAQP50148 359 aa22.17■■□□□ 1.14
RAB3IP-205ENST00000417413 TOB1P50616 345 aaPredicted RBP22.17■■□□□ 1.14
RAB3IP-205ENST00000417413 NR5A1Q13285 461 aa22.17■■□□□ 1.14
RAB3IP-205ENST00000417413 PFKFB3Q16875 520 aaPredicted RBP22.17■■□□□ 1.14
RAB3IP-205ENST00000417413 AXDND1Q5T1B0 1012 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms