RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 MNX1P50219 401 aaPredicted RBP18■□□□□ 0.47
RPS28-201ENST00000417088 USP17L24Q0WX57 530 aa18■□□□□ 0.47
RPS28-201ENST00000417088 PDE3AQ14432 1141 aa18■□□□□ 0.47
RPS28-201ENST00000417088 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
RPS28-201ENST00000417088 TTF1Q15361 905 aaPredicted RBP18■□□□□ 0.47
RPS28-201ENST00000417088 ABCB5Q2M3G0 1257 aa18■□□□□ 0.47
RPS28-201ENST00000417088 MORN1Q5T089 497 aa18■□□□□ 0.47
RPS28-201ENST00000417088 PLEKHH3Q7Z736 793 aa18■□□□□ 0.47
RPS28-201ENST00000417088 ACER1Q8TDN7 264 aa18■□□□□ 0.47
RPS28-201ENST00000417088 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
RPS28-201ENST00000417088 OGDHLQ9ULD0 1010 aa18■□□□□ 0.47
RPS28-201ENST00000417088 CNMDO75829 334 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 PDE6AP16499 860 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 GUCY1A2P33402 732 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 USP14P54578 494 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 SLC9C2Q5TAH2 1124 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 CATSPERGQ6ZRH7 1159 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 CCAR1Q8IX12 1150 aaKnown RBP17.99■□□□□ 0.47
RPS28-201ENST00000417088 RPAP2Q8IXW5 612 aaPredicted RBP17.99■□□□□ 0.47
RPS28-201ENST00000417088 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
RPS28-201ENST00000417088 CLASRPQ8N2M8 674 aaKnown RBP17.99■□□□□ 0.47
RPS28-201ENST00000417088 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.99■□□□□ 0.47
RPS28-201ENST00000417088 KIF1BPQ96EK5 621 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 NBPF3Q9H094 633 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 RABGAP1Q9Y3P9 1069 aa17.99■□□□□ 0.47
RPS28-201ENST00000417088 APBB1O00213 710 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 POLR3DP05423 398 aaPredicted RBP17.98■□□□□ 0.47
RPS28-201ENST00000417088 MS4A1P11836 297 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 ZKSCAN1P17029 563 aaPredicted RBP17.98■□□□□ 0.47
RPS28-201ENST00000417088 VCAM1P19320 739 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 RGS2P41220 211 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 EVX2Q03828 476 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 GABPAQ06546 454 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
RPS28-201ENST00000417088 CCL14Q16627 93 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 SIRT2Q8IXJ6 389 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 CRNKL1Q9BZJ0 848 aaKnown RBP17.98■□□□□ 0.47
RPS28-201ENST00000417088 STAP2Q9UGK3 403 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 ALPK3Q96L96 1907 aa17.98■□□□□ 0.47
RPS28-201ENST00000417088 TCRBV5S4A2TA0A5A2 114 aa17.97■□□□□ 0.47
RPS28-201ENST00000417088 GOLIM4O00461 696 aa17.97■□□□□ 0.47
RPS28-201ENST00000417088 DNAJC2Q99543 621 aaKnown RBP17.97■□□□□ 0.47
RPS28-201ENST00000417088 C11orf49Q9H6J7 331 aa17.97■□□□□ 0.47
RPS28-201ENST00000417088 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
RPS28-201ENST00000417088 MCM9Q9NXL9 1143 aa17.97■□□□□ 0.47
RPS28-201ENST00000417088 ZNF532Q9HCE3 1301 aa17.97■□□□□ 0.47
RPS28-201ENST00000417088 A0A1W2PPC1 479 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 IFIT2P09913 472 aaKnown RBP17.96■□□□□ 0.47
RPS28-201ENST00000417088 MAP2K5Q13163 448 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 SEPT2Q15019 361 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 LBX2Q6XYB7 198 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 C7orf61Q8IZ16 206 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 EDC3Q96F86 508 aaKnown RBP17.96■□□□□ 0.47
RPS28-201ENST00000417088 APBA2Q99767 749 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
RPS28-201ENST00000417088 DDX60LQ5H9U9 1706 aaKnown RBP17.95■□□□□ 0.46
RPS28-201ENST00000417088 HMMRO75330 724 aa17.95■□□□□ 0.46
RPS28-201ENST00000417088 CCND3P30281 292 aaPredicted RBP17.95■□□□□ 0.46
RPS28-201ENST00000417088 CCNA1P78396 465 aa17.95■□□□□ 0.46
RPS28-201ENST00000417088 LCORLQ8N3X6 602 aa17.95■□□□□ 0.46
RPS28-201ENST00000417088 SDR42E1Q8WUS8 393 aa17.95■□□□□ 0.46
RPS28-201ENST00000417088 RPAP3Q9H6T3 665 aaPredicted RBP17.95■□□□□ 0.46
RPS28-201ENST00000417088 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
RPS28-201ENST00000417088 DCP1AQ9NPI6 582 aaPredicted RBP17.95■□□□□ 0.46
RPS28-201ENST00000417088 BTBD7Q9P203 1132 aa17.95■□□□□ 0.46
RPS28-201ENST00000417088 A0A1W2PRG0 241 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 SPDYE16A6NNV3 312 aaPredicted RBP17.94■□□□□ 0.46
RPS28-201ENST00000417088 RAB11FIP3O75154 756 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 GLRX3O76003 335 aaKnown RBP17.94■□□□□ 0.46
RPS28-201ENST00000417088 CYP2D6P10635 497 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 PTPREP23469 700 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 LHX8Q68G74 356 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 GDF15Q99988 308 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 ZMYND8Q9ULU4 1186 aaPredicted RBP17.94■□□□□ 0.46
RPS28-201ENST00000417088 PFASO15067 1338 aa17.94■□□□□ 0.46
RPS28-201ENST00000417088 LAMA3Q16787 3333 aa17.93■□□□□ 0.46
RPS28-201ENST00000417088 SLC15A5A6NIM6 579 aa17.93■□□□□ 0.46
RPS28-201ENST00000417088 WDR78Q5VTH9 848 aa17.93■□□□□ 0.46
RPS28-201ENST00000417088 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
RPS28-201ENST00000417088 FLRT1Q9NZU1 646 aa17.93■□□□□ 0.46
RPS28-201ENST00000417088 NAV1Q8NEY1 1877 aa17.92■□□□□ 0.46
RPS28-201ENST00000417088 MPHOSPH10O00566 681 aaKnown RBP17.92■□□□□ 0.46
RPS28-201ENST00000417088 SOX1O00570 391 aaPredicted RBP17.92■□□□□ 0.46
RPS28-201ENST00000417088 COL6A1P12109 1028 aa17.92■□□□□ 0.46
RPS28-201ENST00000417088 SLFNL1Q499Z3 407 aa17.92■□□□□ 0.46
RPS28-201ENST00000417088 SLC44A5Q8NCS7 719 aa17.92■□□□□ 0.46
RPS28-201ENST00000417088 BOLA2Q9H3K6 86 aa17.92■□□□□ 0.46
RPS28-201ENST00000417088 PAG1Q9NWQ8 432 aa17.92■□□□□ 0.46
RPS28-201ENST00000417088 PRKAB2O43741 272 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 HOXC6P09630 235 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 SYN1P17600 705 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 ATP5JP18859 108 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 BMP8BP34820 402 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 ADD2P35612 726 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 GRB14Q14449 540 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 MFSD14CQ5VZR4 134 aa17.91■□□□□ 0.46
RPS28-201ENST00000417088 DYNLL2Q96FJ2 89 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms