RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 STAG2Q8N3U4 1231 aa8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 SUPT20HQ8NEM7 779 aa8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 NEDD1Q8NHV4 660 aa8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 FAM200AQ8TCP9 573 aa8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 XAGE3Q8WTP9 111 aa8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 C2orf49Q9BVC5 232 aaPredicted RBP8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 PRDM10Q9NQV6 1147 aa8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 DDX21Q9NR30 783 aaKnown RBP eCLIP8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 ATP6V0A2Q9Y487 856 aa8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 LAS1LQ9Y4W2 734 aaKnown RBP8.6□□□□□ -1.03
THUMPD3-202ENST00000416603 WDR33Q9C0J8 1336 aaKnown RBP8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 TMPOP42166 694 aaKnown RBP8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 LBX1P52954 281 aa8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 RALBP1Q15311 655 aa8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 USP50Q70EL3 339 aaPredicted RBP8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 DDX46Q7L014 1031 aaKnown RBP8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 ALDH16A1Q8IZ83 802 aa8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 BCL2L13Q9BXK5 485 aa8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 TRMT112Q9UI30 125 aaKnown RBP8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 NOVA2Q9UNW9 492 aaKnown RBP8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 DUOX1Q9NRD9 1551 aa8.59□□□□□ -1.03
THUMPD3-202ENST00000416603 SH3TC1Q8TE82 1336 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 TRAF5O00463 557 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 OIP5O43482 229 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 HSPA8P11142 646 aaKnown RBP8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 IGFBP4P22692 258 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 ECE1P42892 770 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 GMPSP49915 693 aaPredicted RBP8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 KRT24Q2M2I5 525 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 SLC10A5Q5PT55 438 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 CYP4F22Q6NT55 531 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 NLRP10Q86W26 655 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 GOLGA6L1Q8N7Z2 621 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 CAPNS2Q96L46 248 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 ADARB2Q9NS39 739 aaKnown RBP8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 BABAM1Q9NWV8 329 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 GPRC5DQ9NZD1 345 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 HCN2Q9UL51 889 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 ZNRF3Q9ULT6 936 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 SPEF2Q9C093 1822 aa8.58□□□□□ -1.04
THUMPD3-202ENST00000416603 POLR2AP24928 1970 aaKnown RBP8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 EFSO43281 561 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 RAD17O75943 681 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 BRD1O95696 1058 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 MAP2K1Q02750 393 aaPredicted RBP8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 CXCL9Q07325 125 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 TCIRG1Q13488 830 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 GRAPQ13588 217 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 CIAPIN1Q6FI81 312 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 SP8Q8IXZ3 490 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 GRAPLQ8TC17 118 aaPredicted RBP8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 VPS33BQ9H267 617 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 ZNF408Q9H9D4 720 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 MARK1Q9P0L2 795 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 CHPF2Q9P2E5 772 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 GGA1Q9UJY5 639 aa8.57□□□□□ -1.04
THUMPD3-202ENST00000416603 MYBBP1AQ9BQG0 1328 aaKnown RBP8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 BBOX1O75936 387 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 ARAFP10398 606 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 KIAA2012Q0VF49 1180 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 LAMC2Q13753 1193 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 TNIP1Q15025 636 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 SLCO4C1Q6ZQN7 724 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 GALNT6Q8NCL4 622 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 RTFDC1Q9BY42 306 aaPredicted RBP8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 GLIS2Q9BZE0 524 aaPredicted RBP8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 COL4A1P02462 1669 aa8.56□□□□□ -1.04
THUMPD3-202ENST00000416603 CDHR2Q9BYE9 1310 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 PSME4Q14997 1843 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 MYH3P11055 1940 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 AOC2O75106 756 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 CELF2O95319 508 aaKnown RBP8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 KCNMA1Q12791 1236 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 DDX10Q13206 875 aaKnown RBP8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 CST9Q5W186 159 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 C1orf229Q6ZS94 237 aaPredicted RBP8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 PLBD2Q8NHP8 589 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 EDARADDQ8WWZ3 215 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 RUNDC1Q96C34 613 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 SUSD3Q96L08 255 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 GPR101Q96P66 508 aaPredicted RBP8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 ZMIZ1Q9ULJ6 1067 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 CASP8AP2Q9UKL3 1982 aa8.55□□□□□ -1.04
THUMPD3-202ENST00000416603 SCN9AQ15858 1988 aa8.54□□□□□ -1.04
THUMPD3-202ENST00000416603 NEURL1BA8MQ27 555 aa8.54□□□□□ -1.04
THUMPD3-202ENST00000416603 SHISA8B8ZZ34 492 aa8.54□□□□□ -1.04
THUMPD3-202ENST00000416603 H7C1D1 291 aa8.54□□□□□ -1.04
THUMPD3-202ENST00000416603 CHL1O00533 1208 aa8.54□□□□□ -1.04
THUMPD3-202ENST00000416603 ELOAQ14241 798 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-202ENST00000416603 HIF1AQ16665 826 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms