RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 ACER1Q8TDN7 264 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 LPAR1Q92633 364 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 TRIM43Q96BQ3 446 aaPredicted RBP11.52□□□□□ -0.57
LINC01238-201ENST00000416204 CDCA7LQ96GN5 454 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 AKAP2Q9Y2D5 859 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 LTBP2Q14767 1821 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 COL9A1P20849 921 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 ARID4AP29374 1257 aaPredicted RBP11.51□□□□□ -0.57
LINC01238-201ENST00000416204 ADCYAP1R1P41586 468 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 EPHB4P54760 987 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 PPM1EQ8WY54 764 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 DHX36Q9H2U1 1008 aaKnown RBP11.51□□□□□ -0.57
LINC01238-201ENST00000416204 PDLIM7Q9NR12 457 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 RABGAP1Q9Y3P9 1069 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 IVNS1ABPQ9Y6Y0 642 aa11.51□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L15C9J2P7 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L13C9JLJ4 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 KBTBD13C9JR72 458 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L11C9JVI0 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L18D6R9N7 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L22D6RA61 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L17D6RBQ6 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L19D6RCP7 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L20D6RJB6 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 GLRX3O76003 335 aaKnown RBP11.5□□□□□ -0.57
LINC01238-201ENST00000416204 BAG3O95817 575 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 MAP4K4O95819 1239 aaPredicted RBP11.5□□□□□ -0.57
LINC01238-201ENST00000416204 CYBAP13498 195 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 VCAM1P19320 739 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 ITGB8P26012 769 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 CCNA1P78396 465 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L24Q0WX57 530 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
LINC01238-201ENST00000416204 MIGA1Q8NAN2 632 aa11.5□□□□□ -0.57
LINC01238-201ENST00000416204 E9PSI1 815 aa11.49□□□□□ -0.57
LINC01238-201ENST00000416204 ZBTB22O15209 634 aa11.49□□□□□ -0.57
LINC01238-201ENST00000416204 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
LINC01238-201ENST00000416204 GRB14Q14449 540 aa11.49□□□□□ -0.57
LINC01238-201ENST00000416204 GRIN2CQ14957 1233 aa11.49□□□□□ -0.57
LINC01238-201ENST00000416204 CATSPERGQ6ZRH7 1159 aa11.49□□□□□ -0.57
LINC01238-201ENST00000416204 DPP9Q86TI2 863 aa11.49□□□□□ -0.57
LINC01238-201ENST00000416204 FOXP4Q8IVH2 680 aaPredicted RBP11.49□□□□□ -0.57
LINC01238-201ENST00000416204 GTF3C2Q8WUA4 911 aaPredicted RBP11.49□□□□□ -0.57
LINC01238-201ENST00000416204 RNPC3Q96LT9 517 aaKnown RBP11.49□□□□□ -0.57
LINC01238-201ENST00000416204 RPAP3Q9H6T3 665 aaPredicted RBP11.49□□□□□ -0.57
LINC01238-201ENST00000416204 PIH1D3Q9NQM4 214 aaKnown RBP11.49□□□□□ -0.57
LINC01238-201ENST00000416204 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
LINC01238-201ENST00000416204 MSCO60682 206 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 CYP2E1P05181 493 aaPredicted RBP11.48□□□□□ -0.57
LINC01238-201ENST00000416204 ADORA2AP29274 412 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
LINC01238-201ENST00000416204 EVX2Q03828 476 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 TLE2Q04725 743 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 SLFN5Q08AF3 891 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 ALDH1L2Q3SY69 923 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 FAM47AQ5JRC9 791 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 TTC39AQ5SRH9 613 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
LINC01238-201ENST00000416204 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 DBNDD2Q9BQY9 259 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 TNNQ9UQP3 1299 aa11.48□□□□□ -0.57
LINC01238-201ENST00000416204 PNMA6EA0A0J9YXQ4 647 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 PQBP1O60828 265 aaKnown RBP11.47□□□□□ -0.57
LINC01238-201ENST00000416204 COBLO75128 1261 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 HOXC6P09630 235 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 UQCRFS1P1P0C7P4 283 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 PLCG2P16885 1265 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 CYP7A1P22680 504 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 ZAP70P43403 619 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 PPP4CP60510 307 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 G3BP1Q13283 466 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01238-201ENST00000416204 PLS1Q14651 629 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 LRRC41Q15345 812 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 LENG1Q96BZ8 264 aaPredicted RBP11.47□□□□□ -0.57
LINC01238-201ENST00000416204 C12orf42Q96LP6 360 aa11.47□□□□□ -0.57
LINC01238-201ENST00000416204 MOV10L1Q9BXT6 1211 aaKnown RBP11.47□□□□□ -0.57
LINC01238-201ENST00000416204 API5Q9BZZ5 524 aaKnown RBP11.47□□□□□ -0.57
LINC01238-201ENST00000416204 TNFRSF10AO00220 468 aa11.46□□□□□ -0.57
LINC01238-201ENST00000416204 ERCC3P19447 782 aa11.46□□□□□ -0.57
LINC01238-201ENST00000416204 USP5P45974 858 aa11.46□□□□□ -0.57
LINC01238-201ENST00000416204 SEPT2Q15019 361 aa11.46□□□□□ -0.57
LINC01238-201ENST00000416204 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.57
LINC01238-201ENST00000416204 CERKLQ49MI3 558 aaPredicted RBP11.46□□□□□ -0.57
LINC01238-201ENST00000416204 TANGO6Q9C0B7 1094 aa11.46□□□□□ -0.57
LINC01238-201ENST00000416204 CHD9Q3L8U1 2897 aa11.46□□□□□ -0.58
LINC01238-201ENST00000416204 RLFQ13129 1914 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 XIRP2A4UGR9 3374 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 TMEM265A0A087WTH1 108 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
LINC01238-201ENST00000416204 SEPT4O43236 478 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 IDH1O75874 414 aaKnown RBP11.45□□□□□ -0.58
LINC01238-201ENST00000416204 PGK1P00558 417 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 IGHA2P01877 340 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 DNAJB2P25686 324 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 SNX17Q15036 470 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 KIAA1755Q5JYT7 1200 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms