RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-203ENST00000416123 AOX1Q06278 1338 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 PSMC4P43686 418 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 PRR16Q569H4 304 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 CNGA4Q8IV77 575 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 HOOK2Q96ED9 719 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 TTLL3Q9Y4R7 772 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 ZEB2O60315 1214 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 GAS7O60861 476 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 ATP5JP18859 108 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 CEP152O94986 1710 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 ZBTB16Q05516 673 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
COL12A1-203ENST00000416123 TAB2Q9NYJ8 693 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 DCPSQ96C86 337 aaKnown RBP11.84□□□□□ -0.51
COL12A1-203ENST00000416123 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 ATL3Q6DD88 541 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 MYO1AQ9UBC5 1043 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 NLRP1Q9C000 1473 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 M0QZ92 97 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 CSPG5O95196 566 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 GAS8O95995 478 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 KRT25Q7Z3Z0 450 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 EXOC7Q9UPT5 735 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 PRPF6O94906 941 aaKnown RBP11.84□□□□□ -0.51
COL12A1-203ENST00000416123 PRIMPOLQ96LW4 560 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 DBNDD1Q9H9R9 158 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
COL12A1-203ENST00000416123 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
COL12A1-203ENST00000416123 SYNMO15061 1565 aa11.83□□□□□ -0.51
COL12A1-203ENST00000416123 ATP2B4P23634 1241 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 PHKA1P46020 1223 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 DNM2P50570 870 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 CCDC77Q9BR77 488 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 PLEKHA4Q9H4M7 779 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 NEO1Q92859 1461 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 FAM135BQ49AJ0 1406 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 TNNI1P19237 187 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 CYP2J2P51589 502 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 RAB3IL1Q8TBN0 382 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 PPM1EQ8WY54 764 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 ZMYND15Q9H091 742 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 RBSNQ9H1K0 784 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 MLXIPQ9HAP2 919 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
COL12A1-203ENST00000416123 PLEKHG3A1L390 1219 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 CETN3O15182 167 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 EXOC3O60645 756 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 GABPAQ06546 454 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 LZTS2Q9BRK4 669 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 VPS18Q9P253 973 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 ZNF804BA4D1E1 1349 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 PPP2R5CQ13362 524 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-203ENST00000416123 UTP14CQ5TAP6 766 aaKnown RBP11.83□□□□□ -0.52
COL12A1-203ENST00000416123 EP400NLQ6ZTU2 488 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 SLU7O95391 586 aaKnown RBP11.83□□□□□ -0.52
COL12A1-203ENST00000416123 MTUS1Q9ULD2 1270 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL12A1-203ENST00000416123 FANCCQ00597 558 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 HAUS7Q99871 368 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
COL12A1-203ENST00000416123 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 EAF2Q96CJ1 260 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 TRIM31Q9BZY9 425 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 CBX8Q9HC52 389 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 ARAP3Q8WWN8 1544 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 PDE6AP16499 860 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 IGBP1P78318 339 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 SEC31BQ9NQW1 1179 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 FBF1Q8TES7 1133 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 KCTD1Q719H9 257 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 M0R2C6 588 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 INF2Q27J81 1249 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 CYP26C1Q6V0L0 522 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 AS3MTQ9HBK9 375 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 FLOT1O75955 427 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 ABL1P00519 1130 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 FGAP02671 866 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 HSPD1P10809 573 aaKnown RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 RXRBP28702 533 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms