RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 PTPAQ15257 358 aa19.98■□□□□ 0.79
HDAC10-203ENST00000415993 SF3A1Q15459 793 aaKnown RBP19.98■□□□□ 0.79
HDAC10-203ENST00000415993 ZNF219Q9P2Y4 722 aaPredicted RBP19.98■□□□□ 0.79
HDAC10-203ENST00000415993 SCNN1DP51172 638 aa19.97■□□□□ 0.79
HDAC10-203ENST00000415993 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
HDAC10-203ENST00000415993 AXDND1Q5T1B0 1012 aaPredicted RBP19.97■□□□□ 0.79
HDAC10-203ENST00000415993 APOBEC3HQ6NTF7 200 aaKnown RBP19.97■□□□□ 0.79
HDAC10-203ENST00000415993 KAT14Q9H8E8 782 aa19.97■□□□□ 0.79
HDAC10-203ENST00000415993 DDX4Q9NQI0 724 aaKnown RBP19.97■□□□□ 0.79
HDAC10-203ENST00000415993 hCG_1642624A0A1W2PR95 340 aa19.97■□□□□ 0.79
HDAC10-203ENST00000415993 AKAP17AQ02040 695 aaKnown RBP19.97■□□□□ 0.79
HDAC10-203ENST00000415993 FAM160A1Q05DH4 1040 aa19.97■□□□□ 0.79
HDAC10-203ENST00000415993 SAFBQ15424 915 aaKnown RBP eCLIP19.97■□□□□ 0.79
HDAC10-203ENST00000415993 STRIP1Q5VSL9 837 aa19.97■□□□□ 0.79
HDAC10-203ENST00000415993 PNMA1Q8ND90 353 aa19.97■□□□□ 0.79
HDAC10-203ENST00000415993 C10orf71Q711Q0 1435 aa19.96■□□□□ 0.79
HDAC10-203ENST00000415993 FKBP1AP62942 108 aaKnown RBP19.96■□□□□ 0.79
HDAC10-203ENST00000415993 DACT2Q5SW24 774 aa19.96■□□□□ 0.79
HDAC10-203ENST00000415993 CKAP2LQ8IYA6 745 aa19.96■□□□□ 0.79
HDAC10-203ENST00000415993 FAM43AQ8N2R8 423 aa19.96■□□□□ 0.79
HDAC10-203ENST00000415993 ANP32BQ92688 251 aaKnown RBP19.96■□□□□ 0.79
HDAC10-203ENST00000415993 ECE2O60344 883 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 CCDC192P0DO97 292 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 TOB1P50616 345 aaPredicted RBP19.95■□□□□ 0.78
HDAC10-203ENST00000415993 SF3B2Q13435 895 aaKnown RBP19.95■□□□□ 0.78
HDAC10-203ENST00000415993 FSIP1Q8NA03 581 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 OXER1Q8TDS5 423 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 PDLIM2Q96JY6 352 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 PHF20Q9BVI0 1012 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 VPS54Q9P1Q0 977 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 MYH1P12882 1939 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 GABPAQ06546 454 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 NR5A1Q13285 461 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 CDC42EP5Q6NZY7 148 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 CCDC73Q6ZRK6 1079 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 FMR1NBQ8N0W7 255 aaPredicted RBP19.95■□□□□ 0.78
HDAC10-203ENST00000415993 NEDD1Q8NHV4 660 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 MRPS27Q92552 414 aaKnown RBP19.95■□□□□ 0.78
HDAC10-203ENST00000415993 TEKT1Q969V4 418 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 USP40Q9NVE5 1235 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 SCN9AQ15858 1988 aa19.95■□□□□ 0.78
HDAC10-203ENST00000415993 PICALMQ13492 652 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 CC2D2BQ6DHV5 1058 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 TMEM47Q9BQJ4 181 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 MRIQ9BWK5 157 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.94■□□□□ 0.78
HDAC10-203ENST00000415993 ADAMTSL1Q8N6G6 1762 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 PPP6R2O75170 966 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 KIF5BP33176 963 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 NOVP48745 357 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 KIAA2012Q0VF49 1180 aa19.94■□□□□ 0.78
HDAC10-203ENST00000415993 ZNF646O15015 1829 aaPredicted RBP19.94■□□□□ 0.78
HDAC10-203ENST00000415993 A0A1B0GVL5 298 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 CRKP46108 304 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 AOC3Q16853 763 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 UVSSAQ2YD98 709 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 ZDHHC15Q96MV8 337 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.93■□□□□ 0.78
HDAC10-203ENST00000415993 MYH6P13533 1939 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 XBP1P17861 261 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 MARCKSP29966 332 aaPredicted RBP19.93■□□□□ 0.78
HDAC10-203ENST00000415993 NDUFA8P51970 172 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 TYRO3Q06418 890 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 GRM4Q14833 912 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 NPY5RQ15761 445 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 STAG2Q8N3U4 1231 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 MAD2L2Q9UI95 211 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 STX8Q9UNK0 236 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 MRVI1Q9Y6F6 885 aa19.93■□□□□ 0.78
HDAC10-203ENST00000415993 KIAA0825Q8IV33 1275 aa19.92■□□□□ 0.78
HDAC10-203ENST00000415993 C21orf2O43822 256 aa19.92■□□□□ 0.78
HDAC10-203ENST00000415993 VEGFAP15692 232 aaPredicted RBP19.92■□□□□ 0.78
HDAC10-203ENST00000415993 CMA1P23946 247 aa19.92■□□□□ 0.78
HDAC10-203ENST00000415993 RILPL1Q5EBL4 403 aa19.92■□□□□ 0.78
HDAC10-203ENST00000415993 PFKFB3Q16875 520 aaPredicted RBP19.91■□□□□ 0.78
HDAC10-203ENST00000415993 SLC35G1Q2M3R5 365 aa19.91■□□□□ 0.78
HDAC10-203ENST00000415993 OSBPL5Q9H0X9 879 aaPredicted RBP19.91■□□□□ 0.78
HDAC10-203ENST00000415993 PCDHAC2Q9Y5I4 1007 aa19.91■□□□□ 0.78
HDAC10-203ENST00000415993 CTAGE5O15320 804 aa19.91■□□□□ 0.78
HDAC10-203ENST00000415993 KINO60870 393 aaKnown RBP19.91■□□□□ 0.78
HDAC10-203ENST00000415993 SCG2P13521 617 aa19.91■□□□□ 0.78
HDAC10-203ENST00000415993 KCNA3P22001 575 aa19.91■□□□□ 0.78
HDAC10-203ENST00000415993 HDLBPQ00341 1268 aaKnown RBP19.91■□□□□ 0.78
HDAC10-203ENST00000415993 NFIAQ12857 509 aa19.91■□□□□ 0.78
HDAC10-203ENST00000415993 SLC16A10Q8TF71 515 aa19.91■□□□□ 0.78
HDAC10-203ENST00000415993 TNFRSF25Q93038 417 aa19.9■□□□□ 0.78
HDAC10-203ENST00000415993 CEP95Q96GE4 821 aa19.9■□□□□ 0.78
HDAC10-203ENST00000415993 PLIN4Q96Q06 1357 aa19.9■□□□□ 0.78
HDAC10-203ENST00000415993 PALM3A6NDB9 673 aaPredicted RBP19.9■□□□□ 0.78
HDAC10-203ENST00000415993 EARS2Q5JPH6 523 aaKnown RBP19.9■□□□□ 0.78
HDAC10-203ENST00000415993 JMYQ8N9B5 988 aa19.9■□□□□ 0.78
HDAC10-203ENST00000415993 SUPT20HQ8NEM7 779 aa19.9■□□□□ 0.78
HDAC10-203ENST00000415993 YDJCA8MPS7 323 aa19.89■□□□□ 0.77
HDAC10-203ENST00000415993 KRT2P35908 639 aa19.89■□□□□ 0.77
HDAC10-203ENST00000415993 SHC4Q6S5L8 630 aa19.89■□□□□ 0.77
HDAC10-203ENST00000415993 TTLL6Q8N841 843 aa19.89■□□□□ 0.77
HDAC10-203ENST00000415993 CABP5Q9NP86 173 aa19.89■□□□□ 0.77
HDAC10-203ENST00000415993 SERPINB13Q9UIV8 391 aa19.89■□□□□ 0.77
HDAC10-203ENST00000415993 CYTH3O43739 400 aa19.88■□□□□ 0.77
HDAC10-203ENST00000415993 PCDHB6Q9Y5E3 794 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms