RNA–Protein interactions for RNA: ENST00000415824.1

AP001043.1-203, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 407 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-203ENST00000415824 C12orf42Q96LP6 360 aa9.1□□□□□ -0.95
AP001043.1-203ENST00000415824 GAS2L1Q99501 681 aaPredicted RBP9.1□□□□□ -0.95
AP001043.1-203ENST00000415824 PRDM5Q9NQX1 630 aaPredicted RBP9.1□□□□□ -0.95
AP001043.1-203ENST00000415824 GNL3LQ9NVN8 582 aaKnown RBP9.1□□□□□ -0.95
AP001043.1-203ENST00000415824 TMOD4Q9NZQ9 345 aa9.1□□□□□ -0.95
AP001043.1-203ENST00000415824 PHF24Q9UPV7 400 aa9.1□□□□□ -0.95
AP001043.1-203ENST00000415824 MYO15AQ9UKN7 3530 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 GBF1Q92538 1859 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 FAM196BA6NMK8 535 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 USP17L10C9JJH3 530 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 CLTBP09497 229 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 BTDP43251 543 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 CCNA1P78396 465 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 TLE2Q04725 743 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 FPGSQ05932 587 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 NPLOC4Q8TAT6 608 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 KLHDC4Q8TBB5 520 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 SNX27Q96L92 541 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 PRRC2BQ5JSZ5 2229 aaKnown RBP9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 ROBO3Q96MS0 1386 aa9.09□□□□□ -0.95
AP001043.1-203ENST00000415824 A0A0G2JMZ2 1700 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 GPR37L1O60883 481 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 CIAO1O76071 339 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 CYP2C19P33261 490 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 PHKA1P46020 1223 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 JAG1P78504 1218 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 ATP2B2Q01814 1243 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 PICALMQ13492 652 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 LRRC41Q15345 812 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 ANKRD33Q7Z3H0 272 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 DZIP1Q86YF9 867 aaKnown RBP9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 CCAR1Q8IX12 1150 aaKnown RBP9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 TOX2Q96NM4 488 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 PBX4Q9BYU1 374 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 PRDM12Q9H4Q4 367 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 EMILIN3Q9NT22 766 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 PI4KBQ9UBF8 816 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 DMDP11532 3685 aa9.08□□□□□ -0.96
AP001043.1-203ENST00000415824 CNGA1P29973 690 aa9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 ADCYAP1R1P41586 468 aa9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 RASGRF1Q13972 1273 aa9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 ATP2B3Q16720 1220 aa9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 SPTY2D1Q68D10 685 aaPredicted RBP9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 NECAB3Q96P71 396 aaPredicted RBP9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 DHX36Q9H2U1 1008 aaKnown RBP9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 DNAJC18Q9H819 358 aa9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 C11orf16Q9NQ32 467 aa9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 ZNFX1Q9P2E3 1918 aaKnown RBP9.07□□□□□ -0.96
AP001043.1-203ENST00000415824 WDR87Q6ZQQ6 2873 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 ZNF318Q5VUA4 2279 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 SPTBN4Q9H254 2564 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 STRNO43815 780 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 RAG1P15918 1043 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 POU3F3P20264 500 aaPredicted RBP9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 MECOMQ03112 1051 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 FAAP100Q0VG06 881 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 AAK1Q2M2I8 961 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 TMEM31Q5JXX7 168 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 CCDC102BQ68D86 513 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 C16orf59Q7L2K0 433 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 IL27Q8NEV9 243 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 PAGR1Q9BTK6 254 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 EPHX3Q9H6B9 360 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 NRBP1Q9UHY1 535 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 TBX21Q9UL17 535 aa9.06□□□□□ -0.96
AP001043.1-203ENST00000415824 LRRC37A2A6NM11 1700 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 ERC2O15083 957 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 TIMP1P01033 207 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 PBX2P40425 430 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 EXOSC9Q06265 439 aaKnown RBP9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 RAB30Q15771 203 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 TMEM240Q5SV17 173 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 MFSD5Q6N075 450 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 SLC4A10Q6U841 1118 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 CATSPERGQ6ZRH7 1159 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 FOXP4Q8IVH2 680 aaPredicted RBP9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 WDR63Q8IWG1 891 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 TRMT2AQ8IZ69 625 aaKnown RBP9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 NSUN4Q96CB9 384 aaKnown RBP9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 USP44Q9H0E7 712 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 TSPYL2Q9H2G4 693 aaPredicted RBP9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 BTBD7Q9P203 1132 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 ZBTB21Q9ULJ3 1066 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 IVNS1ABPQ9Y6Y0 642 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 ZDBF2Q9HCK1 2354 aa9.05□□□□□ -0.96
AP001043.1-203ENST00000415824 LDHCP07864 332 aa9.04□□□□□ -0.96
AP001043.1-203ENST00000415824 FAM47AQ5JRC9 791 aa9.04□□□□□ -0.96
AP001043.1-203ENST00000415824 CCDC174Q6PII3 467 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms