RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 DYNLL1P63167 89 aaKnown RBP18.82■□□□□ 0.6
DDX56-202ENST00000415758 CCNA1P78396 465 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 LRRC26Q2I0M4 334 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 TMED8Q6PL24 325 aaPredicted RBP18.82■□□□□ 0.6
DDX56-202ENST00000415758 LBX2Q6XYB7 198 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
DDX56-202ENST00000415758 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
DDX56-202ENST00000415758 EHD4Q9H223 541 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 CUL9Q8IWT3 2517 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 SURF6O75683 361 aaKnown RBP18.81■□□□□ 0.6
DDX56-202ENST00000415758 HOXC6P09630 235 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 CYP7A1P22680 504 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 USP14P54578 494 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 OS9Q13438 667 aaPredicted RBP18.81■□□□□ 0.6
DDX56-202ENST00000415758 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 Q7L0L9 218 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 KIAA1683Q9H0B3 1180 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 SERPINB13Q9UIV8 391 aa18.81■□□□□ 0.6
DDX56-202ENST00000415758 DBNLQ9UJU6 430 aaKnown RBP18.81■□□□□ 0.6
DDX56-202ENST00000415758 FRMPD3Q5JV73 1810 aa18.8■□□□□ 0.6
DDX56-202ENST00000415758 SLC15A5A6NIM6 579 aa18.8■□□□□ 0.6
DDX56-202ENST00000415758 DNAH12Q6ZR08 3092 aa18.79■□□□□ 0.6
DDX56-202ENST00000415758 IGHA2P01877 340 aa18.79■□□□□ 0.6
DDX56-202ENST00000415758 PTPREP23469 700 aa18.79■□□□□ 0.6
DDX56-202ENST00000415758 MFSD14CQ5VZR4 134 aa18.79■□□□□ 0.6
DDX56-202ENST00000415758 TTC6Q86TZ1 520 aa18.79■□□□□ 0.6
DDX56-202ENST00000415758 FLRT1Q9NZU1 646 aa18.79■□□□□ 0.6
DDX56-202ENST00000415758 CCER2I3L3R5 266 aa18.78■□□□□ 0.6
DDX56-202ENST00000415758 MSCO60682 206 aa18.78■□□□□ 0.6
DDX56-202ENST00000415758 IDH1O75874 414 aaKnown RBP18.78■□□□□ 0.6
DDX56-202ENST00000415758 VCAM1P19320 739 aa18.78■□□□□ 0.6
DDX56-202ENST00000415758 USP5P45974 858 aa18.78■□□□□ 0.6
DDX56-202ENST00000415758 CERKLQ49MI3 558 aaPredicted RBP18.78■□□□□ 0.6
DDX56-202ENST00000415758 ZKSCAN2Q63HK3 967 aa18.78■□□□□ 0.6
DDX56-202ENST00000415758 EAF2Q96CJ1 260 aaPredicted RBP18.78■□□□□ 0.6
DDX56-202ENST00000415758 FEZ1Q99689 392 aa18.78■□□□□ 0.6
DDX56-202ENST00000415758 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
DDX56-202ENST00000415758 POTEB2H3BUK9 544 aa18.77■□□□□ 0.6
DDX56-202ENST00000415758 GRB14Q14449 540 aa18.77■□□□□ 0.6
DDX56-202ENST00000415758 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
DDX56-202ENST00000415758 ABCB5Q2M3G0 1257 aa18.77■□□□□ 0.6
DDX56-202ENST00000415758 FAM109BQ6ICB4 259 aaPredicted RBP18.77■□□□□ 0.6
DDX56-202ENST00000415758 MIGA1Q8NAN2 632 aa18.77■□□□□ 0.6
DDX56-202ENST00000415758 ACER1Q8TDN7 264 aa18.77■□□□□ 0.6
DDX56-202ENST00000415758 LPAR1Q92633 364 aa18.77■□□□□ 0.6
DDX56-202ENST00000415758 CCDC8Q9H0W5 538 aaPredicted RBP18.77■□□□□ 0.6
DDX56-202ENST00000415758 TLR7Q9NYK1 1049 aaKnown RBP18.77■□□□□ 0.6
DDX56-202ENST00000415758 BTBD7Q9P203 1132 aa18.77■□□□□ 0.6
DDX56-202ENST00000415758 DDX20Q9UHI6 824 aaKnown RBP18.77■□□□□ 0.6
DDX56-202ENST00000415758 MDM2Q00987 491 aaPredicted RBP18.76■□□□□ 0.59
DDX56-202ENST00000415758 RAB3GAP1Q15042 981 aa18.76■□□□□ 0.59
DDX56-202ENST00000415758 MAGEB6Q8N7X4 407 aa18.76■□□□□ 0.59
DDX56-202ENST00000415758 SENP6Q9GZR1 1112 aaPredicted RBP18.76■□□□□ 0.59
DDX56-202ENST00000415758 CABP5Q9NP86 173 aa18.76■□□□□ 0.59
DDX56-202ENST00000415758 SPDYE16A6NNV3 312 aaPredicted RBP18.75■□□□□ 0.59
DDX56-202ENST00000415758 GUCY1A2P33402 732 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 SHMT1P34896 483 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 PLCD1P51178 756 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 ATP2B2Q01814 1243 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 MAP3K12Q12852 859 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 NPLOC4Q8TAT6 608 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 RIOK1Q9BRS2 568 aaKnown RBP18.75■□□□□ 0.59
DDX56-202ENST00000415758 ANTXR1Q9H6X2 564 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 IVNS1ABPQ9Y6Y0 642 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 UNC80Q8N2C7 3258 aa18.75■□□□□ 0.59
DDX56-202ENST00000415758 DNM1LO00429 736 aa18.74■□□□□ 0.59
DDX56-202ENST00000415758 STRNO43815 780 aa18.74■□□□□ 0.59
DDX56-202ENST00000415758 GABPAQ06546 454 aa18.74■□□□□ 0.59
DDX56-202ENST00000415758 WDR78Q5VTH9 848 aa18.74■□□□□ 0.59
DDX56-202ENST00000415758 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
DDX56-202ENST00000415758 HOXC10Q9NYD6 342 aa18.74■□□□□ 0.59
DDX56-202ENST00000415758 LAMA2P24043 3122 aaKnown RBP18.74■□□□□ 0.59
DDX56-202ENST00000415758 COG2Q14746 738 aa18.73■□□□□ 0.59
DDX56-202ENST00000415758 TRPV1Q8NER1 839 aa18.73■□□□□ 0.59
DDX56-202ENST00000415758 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
DDX56-202ENST00000415758 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
DDX56-202ENST00000415758 CYBAP13498 195 aa18.72■□□□□ 0.59
DDX56-202ENST00000415758 CNGA1P29973 690 aa18.72■□□□□ 0.59
DDX56-202ENST00000415758 CYP2C19P33261 490 aa18.72■□□□□ 0.59
DDX56-202ENST00000415758 OLFML2BQ68BL8 750 aa18.72■□□□□ 0.59
DDX56-202ENST00000415758 ZNF236Q9UL36 1845 aa18.72■□□□□ 0.59
DDX56-202ENST00000415758 RLFQ13129 1914 aa18.71■□□□□ 0.59
DDX56-202ENST00000415758 SEPT2Q15019 361 aa18.71■□□□□ 0.59
DDX56-202ENST00000415758 ARRDC4Q8NCT1 418 aa18.71■□□□□ 0.59
DDX56-202ENST00000415758 SHCBP1Q8NEM2 672 aa18.71■□□□□ 0.59
DDX56-202ENST00000415758 MOV10L1Q9BXT6 1211 aaKnown RBP18.71■□□□□ 0.59
DDX56-202ENST00000415758 A0A1W2PRG0 241 aa18.7■□□□□ 0.58
DDX56-202ENST00000415758 ATN1P54259 1190 aaPredicted RBP18.7■□□□□ 0.58
DDX56-202ENST00000415758 DPP9Q86TI2 863 aa18.7■□□□□ 0.58
DDX56-202ENST00000415758 GUCD1Q96NT3 240 aa18.7■□□□□ 0.58
DDX56-202ENST00000415758 MAGEB6P1A0A0J9YX57 407 aa18.69■□□□□ 0.58
DDX56-202ENST00000415758 POLR3DP05423 398 aaPredicted RBP18.69■□□□□ 0.58
DDX56-202ENST00000415758 ADORA2AP29274 412 aa18.69■□□□□ 0.58
DDX56-202ENST00000415758 RTP1P59025 263 aa18.69■□□□□ 0.58
DDX56-202ENST00000415758 TTF1Q15361 905 aaPredicted RBP18.69■□□□□ 0.58
DDX56-202ENST00000415758 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
DDX56-202ENST00000415758 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms