RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 USP17L19D6RCP7 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L20D6RJB6 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 MPHOSPH10O00566 681 aaKnown RBP24.61■■□□□ 1.53
PTPRU-203ENST00000415600 MBD4O95243 580 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 INHAP05111 366 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 MAPK4P31152 587 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L24Q0WX57 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 SDR42E1Q8WUS8 393 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 EDC3Q96F86 508 aaKnown RBP24.61■■□□□ 1.53
PTPRU-203ENST00000415600 ARMT1Q9H993 441 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 CWC22Q9HCG8 908 aaKnown RBP24.61■■□□□ 1.53
PTPRU-203ENST00000415600 ELNP15502 786 aa24.6■■□□□ 1.53
PTPRU-203ENST00000415600 SHMT1P34896 483 aa24.6■■□□□ 1.53
PTPRU-203ENST00000415600 SHROOM1Q2M3G4 852 aaPredicted RBP24.6■■□□□ 1.53
PTPRU-203ENST00000415600 SOCS4Q8WXH5 440 aa24.6■■□□□ 1.53
PTPRU-203ENST00000415600 DCTPP1Q9H773 170 aa24.6■■□□□ 1.53
PTPRU-203ENST00000415600 NAV1Q8NEY1 1877 aa24.6■■□□□ 1.53
PTPRU-203ENST00000415600 CCNA1P78396 465 aa24.59■■□□□ 1.53
PTPRU-203ENST00000415600 GABPAQ06546 454 aa24.59■■□□□ 1.53
PTPRU-203ENST00000415600 LRRFIP1Q32MZ4 808 aaKnown RBP24.59■■□□□ 1.53
PTPRU-203ENST00000415600 BRCA2P51587 3418 aa24.59■■□□□ 1.53
PTPRU-203ENST00000415600 HMGCRP04035 888 aa24.59■■□□□ 1.53
PTPRU-203ENST00000415600 ZYXQ15942 572 aaKnown RBP24.59■■□□□ 1.53
PTPRU-203ENST00000415600 U2AF1L4Q8WU68 220 aaKnown RBP24.59■■□□□ 1.53
PTPRU-203ENST00000415600 HTATIP2Q9BUP3 242 aa24.59■■□□□ 1.53
PTPRU-203ENST00000415600 SMARCA5O60264 1052 aaPredicted RBP24.58■■□□□ 1.52
PTPRU-203ENST00000415600 GLRX3O76003 335 aaKnown RBP24.58■■□□□ 1.52
PTPRU-203ENST00000415600 SLC34A2O95436 690 aa24.58■■□□□ 1.52
PTPRU-203ENST00000415600 TMEM179Q6ZVK1 233 aa24.58■■□□□ 1.52
PTPRU-203ENST00000415600 TRMT44Q8IYL2 757 aaKnown RBP24.58■■□□□ 1.52
PTPRU-203ENST00000415600 NUDT12Q9BQG2 462 aa24.58■■□□□ 1.52
PTPRU-203ENST00000415600 UNC93B1Q9H1C4 597 aa24.58■■□□□ 1.52
PTPRU-203ENST00000415600 SH2D4AQ9H788 454 aa24.58■■□□□ 1.52
PTPRU-203ENST00000415600 ERVK-9P63128 1117 aa24.57■■□□□ 1.52
PTPRU-203ENST00000415600 ERVK-24P63145 666 aa24.57■■□□□ 1.52
PTPRU-203ENST00000415600 PAGR1Q9BTK6 254 aa24.57■■□□□ 1.52
PTPRU-203ENST00000415600 ZBTB47Q9UFB7 747 aaPredicted RBP24.57■■□□□ 1.52
PTPRU-203ENST00000415600 SGPL1O95470 568 aa24.56■■□□□ 1.52
PTPRU-203ENST00000415600 CCDC17Q96LX7 622 aa24.56■■□□□ 1.52
PTPRU-203ENST00000415600 RABGAP1Q9Y3P9 1069 aa24.56■■□□□ 1.52
PTPRU-203ENST00000415600 TFRCP02786 760 aaKnown RBP24.55■■□□□ 1.52
PTPRU-203ENST00000415600 VCAM1P19320 739 aa24.55■■□□□ 1.52
PTPRU-203ENST00000415600 SHISA4Q96DD7 197 aa24.55■■□□□ 1.52
PTPRU-203ENST00000415600 ARHGEF10LQ9HCE6 1279 aa24.55■■□□□ 1.52
PTPRU-203ENST00000415600 RBPJLQ9UBG7 517 aa24.55■■□□□ 1.52
PTPRU-203ENST00000415600 GJD2Q9UKL4 321 aa24.55■■□□□ 1.52
PTPRU-203ENST00000415600 PCDHB15Q9Y5E8 787 aa24.55■■□□□ 1.52
PTPRU-203ENST00000415600 SLC4A4Q9Y6R1 1079 aa24.55■■□□□ 1.52
PTPRU-203ENST00000415600 DDX60LQ5H9U9 1706 aaKnown RBP24.55■■□□□ 1.52
PTPRU-203ENST00000415600 XRCC5P13010 732 aaKnown RBP24.54■■□□□ 1.52
PTPRU-203ENST00000415600 SEPT2Q15019 361 aa24.54■■□□□ 1.52
PTPRU-203ENST00000415600 CATSPERGQ6ZRH7 1159 aa24.54■■□□□ 1.52
PTPRU-203ENST00000415600 TXNRD2Q9NNW7 524 aa24.54■■□□□ 1.52
PTPRU-203ENST00000415600 MKI67P46013 3256 aaKnown RBP24.54■■□□□ 1.52
PTPRU-203ENST00000415600 ERC2O15083 957 aa24.54■■□□□ 1.52
PTPRU-203ENST00000415600 FARP2O94887 1054 aaPredicted RBP24.54■■□□□ 1.52
PTPRU-203ENST00000415600 IGHDP01880 384 aa24.54■■□□□ 1.52
PTPRU-203ENST00000415600 ZFYP08048 801 aaPredicted RBP24.54■■□□□ 1.52
PTPRU-203ENST00000415600 ACER1Q8TDN7 264 aa24.54■■□□□ 1.52
PTPRU-203ENST00000415600 DEFB118Q96PH6 123 aa24.54■■□□□ 1.52
PTPRU-203ENST00000415600 PRKAB2O43741 272 aa24.53■■□□□ 1.52
PTPRU-203ENST00000415600 KBTBD3Q8NAB2 608 aa24.53■■□□□ 1.52
PTPRU-203ENST00000415600 DPF3Q92784 378 aa24.53■■□□□ 1.52
PTPRU-203ENST00000415600 HMX1Q9NP08 348 aaPredicted RBP24.53■■□□□ 1.52
PTPRU-203ENST00000415600 PAK6Q9NQU5 681 aaPredicted RBP24.53■■□□□ 1.52
PTPRU-203ENST00000415600 ARPP21Q9UBL0 812 aaPredicted RBP24.53■■□□□ 1.52
PTPRU-203ENST00000415600 DOCK3Q8IZD9 2030 aa24.53■■□□□ 1.52
PTPRU-203ENST00000415600 RGS2P41220 211 aa24.52■■□□□ 1.52
PTPRU-203ENST00000415600 C12orf60Q5U649 245 aa24.52■■□□□ 1.52
PTPRU-203ENST00000415600 LBX2Q6XYB7 198 aa24.52■■□□□ 1.52
PTPRU-203ENST00000415600 PLEKHH3Q7Z736 793 aa24.52■■□□□ 1.52
PTPRU-203ENST00000415600 LPAR1Q92633 364 aa24.52■■□□□ 1.52
PTPRU-203ENST00000415600 RPAP3Q9H6T3 665 aaPredicted RBP24.52■■□□□ 1.52
PTPRU-203ENST00000415600 HOXC10Q9NYD6 342 aa24.52■■□□□ 1.52
PTPRU-203ENST00000415600 TTC41PQ6P2S7 1318 aa24.51■■□□□ 1.51
PTPRU-203ENST00000415600 RPTORQ8N122 1335 aa24.51■■□□□ 1.51
PTPRU-203ENST00000415600 USP17L12C9JPN9 530 aa24.51■■□□□ 1.51
PTPRU-203ENST00000415600 USP17L21D6R901 530 aa24.51■■□□□ 1.51
PTPRU-203ENST00000415600 CYP2D6P10635 497 aa24.51■■□□□ 1.51
PTPRU-203ENST00000415600 CYP2B6P20813 491 aa24.51■■□□□ 1.51
PTPRU-203ENST00000415600 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.51■■□□□ 1.512e-11■■■■□ 19.8
PTPRU-203ENST00000415600 IVNS1ABPQ9Y6Y0 642 aa24.51■■□□□ 1.51
PTPRU-203ENST00000415600 ZKSCAN1P17029 563 aaPredicted RBP24.5■■□□□ 1.51
PTPRU-203ENST00000415600 GUCY1A2P33402 732 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 GIMAP6Q6P9H5 292 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 GPR142Q7Z601 462 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 TANGO6Q9C0B7 1094 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 MYH7P12883 1935 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 GNAT2P19087 354 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 ICA1Q05084 483 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 C16orf86Q6ZW13 317 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 SLC44A5Q8NCS7 719 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 APPBP2Q92624 585 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 DYNLL2Q96FJ2 89 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 PUS7LQ9H0K6 701 aaKnown RBP24.5■■□□□ 1.51
PTPRU-203ENST00000415600 NR2E3Q9Y5X4 410 aa24.5■■□□□ 1.51
PTPRU-203ENST00000415600 CDK8P49336 464 aa24.49■■□□□ 1.51
PTPRU-203ENST00000415600 COG2Q14746 738 aa24.49■■□□□ 1.51
PTPRU-203ENST00000415600 Q3C1V9 767 aa24.49■■□□□ 1.51
PTPRU-203ENST00000415600 WDR78Q5VTH9 848 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms