RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 RCAN1P53805 252 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 ELF2Q15723 593 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 TXNRD3Q86VQ6 643 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 AMIGO3Q86WK7 504 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
RBM28-202ENST00000415472 AFMP43652 599 aa13.35□□□□□ -0.27
RBM28-202ENST00000415472 CAVIN4Q5BKX8 364 aa13.35□□□□□ -0.27
RBM28-202ENST00000415472 FBXO33Q7Z6M2 555 aa13.35□□□□□ -0.27
RBM28-202ENST00000415472 SRBD1Q8N5C6 995 aaKnown RBP13.35□□□□□ -0.27
RBM28-202ENST00000415472 SMARCE1Q969G3 411 aa13.35□□□□□ -0.27
RBM28-202ENST00000415472 BRIP1Q9BX63 1249 aa13.35□□□□□ -0.27
RBM28-202ENST00000415472 TRIM75PA6NK02 468 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 PRPF3O43395 683 aaKnown RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 FGRP09769 529 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 TOP1P11387 765 aaKnown RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 ZNF174Q15697 407 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 KMT5BQ4FZB7 885 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 SMYD4Q8IYR2 804 aaPredicted RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 TNFRSF25Q93038 417 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 GTF2E1P29083 439 aaPredicted RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 KRT2P35908 639 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 KCNJ6P48051 423 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 AKAP17AQ02040 695 aaKnown RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 TBX2Q13207 712 aaPredicted RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 SPATA20Q8TB22 786 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 STAMQ92783 540 aa13.34□□□□□ -0.27
RBM28-202ENST00000415472 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
RBM28-202ENST00000415472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
RBM28-202ENST00000415472 COBLO75128 1261 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 ZSCAN20P17040 1043 aaPredicted RBP13.33□□□□□ -0.28
RBM28-202ENST00000415472 ADKP55263 362 aaKnown RBP13.33□□□□□ -0.28
RBM28-202ENST00000415472 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
RBM28-202ENST00000415472 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 REXO1L1PQ8IX06 675 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 L2HGDHQ9H9P8 463 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 CNTNAP5Q8WYK1 1306 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 STX17P56962 302 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 CCDC93Q567U6 631 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 SMAP1Q8IYB5 467 aaPredicted RBP13.33□□□□□ -0.28
RBM28-202ENST00000415472 MLKLQ8NB16 471 aa13.33□□□□□ -0.28
RBM28-202ENST00000415472 SLU7O95391 586 aaKnown RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 IL17AQ16552 155 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 KLHL10Q6JEL2 608 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 IQCA1Q86XH1 822 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 TC2NQ8N9U0 490 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 PAGE5Q96GU1 130 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 DNAI1Q9UI46 699 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 HOOK1Q9UJC3 728 aaKnown RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 TEX33O43247 280 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 CDK11BP21127 795 aaKnown RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 DPYDQ12882 1025 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 ERCC6LQ2NKX8 1250 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 SLC10A5Q5PT55 438 aa13.32□□□□□ -0.28
RBM28-202ENST00000415472 APTXQ7Z2E3 356 aaKnown RBP13.32□□□□□ -0.28
RBM28-202ENST00000415472 VWA3AA6NCI4 1184 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 PLCD1P51178 756 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 PTGDRQ13258 359 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 BARGINQ6ZT62 677 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 TOGARAM2Q6ZUX3 1019 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
RBM28-202ENST00000415472 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
RBM28-202ENST00000415472 KIF2AO00139 706 aaPredicted RBP13.3□□□□□ -0.28
RBM28-202ENST00000415472 SLFN14P0C7P3 912 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 HIBADHP31937 336 aaKnown RBP13.3□□□□□ -0.28
RBM28-202ENST00000415472 PPP2R5BQ15173 497 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 TTC38Q5R3I4 469 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 FAM177A1Q8N128 213 aaPredicted RBP13.3□□□□□ -0.28
RBM28-202ENST00000415472 ORC4O43929 436 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 DDAH1O94760 285 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 XBP1P17861 261 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 CUL4BQ13620 913 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 MTF1Q14872 753 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 GRIK5Q16478 980 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 SPECC1LQ69YQ0 1117 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 MTRQ99707 1265 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 RBM28Q9NW13 759 aaKnown RBP13.3□□□□□ -0.28
RBM28-202ENST00000415472 PRDM4Q9UKN5 801 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 PPP2R2CQ9Y2T4 447 aa13.3□□□□□ -0.28
RBM28-202ENST00000415472 MYO1BO43795 1136 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms