RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
CLGN-202ENST00000414773 FBXO18Q8NFZ0 1043 aa12.75□□□□□ -0.37
CLGN-202ENST00000414773 ANKS1AQ92625 1134 aa12.75□□□□□ -0.37
CLGN-202ENST00000414773 GZF1Q9H116 711 aaPredicted RBP12.75□□□□□ -0.37
CLGN-202ENST00000414773 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
CLGN-202ENST00000414773 SWAP70Q9UH65 585 aa12.75□□□□□ -0.37
CLGN-202ENST00000414773 DDX49Q9Y6V7 483 aaKnown RBP12.75□□□□□ -0.37
CLGN-202ENST00000414773 TNIP1Q15025 636 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 TRIM22Q8IYM9 498 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 CTCFLQ8NI51 663 aaPredicted RBP12.74□□□□□ -0.37
CLGN-202ENST00000414773 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLGN-202ENST00000414773 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 STK36Q9NRP7 1315 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
CLGN-202ENST00000414773 DNAJC18Q9H819 358 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
CLGN-202ENST00000414773 TMOD2Q9NZR1 351 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
CLGN-202ENST00000414773 ZNF70Q9UC06 446 aaPredicted RBP12.74□□□□□ -0.37
CLGN-202ENST00000414773 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
CLGN-202ENST00000414773 SKOR2Q2VWA4 1001 aaPredicted RBP12.73□□□□□ -0.37
CLGN-202ENST00000414773 TPRNQ4KMQ1 711 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 EHD4Q9H223 541 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 TFIP11Q9UBB9 837 aaKnown RBP12.73□□□□□ -0.37
CLGN-202ENST00000414773 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 hCG_1642624A0A1W2PR95 340 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
CLGN-202ENST00000414773 ENTPD3O75355 529 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
CLGN-202ENST00000414773 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
CLGN-202ENST00000414773 EIF6P56537 245 aaKnown RBP12.72□□□□□ -0.37
CLGN-202ENST00000414773 KRT85P78386 507 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 FUT2Q10981 343 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 KRT40Q6A162 431 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
CLGN-202ENST00000414773 SIPA1L1O43166 1804 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 MYH8P13535 1937 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 FZD9O00144 591 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 NBPF9Q3BBW0 867 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 RBM26Q5T8P6 1007 aaKnown RBP12.72□□□□□ -0.37
CLGN-202ENST00000414773 RASGRP2Q7LDG7 609 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 GPT2Q8TD30 523 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 MYOZ2Q9NPC6 264 aa12.72□□□□□ -0.37
CLGN-202ENST00000414773 DEXIO95424 95 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 AKAP17AQ02040 695 aaKnown RBP12.71□□□□□ -0.37
CLGN-202ENST00000414773 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 STAG2Q8N3U4 1231 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 WASF1Q92558 559 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.37
CLGN-202ENST00000414773 MTMR4Q9NYA4 1195 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.37
CLGN-202ENST00000414773 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 WNT10BO00744 389 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 KIF5BP33176 963 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 GMPSP49915 693 aaPredicted RBP12.71□□□□□ -0.37
CLGN-202ENST00000414773 TRIM29Q14134 588 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
CLGN-202ENST00000414773 TMEM87AQ8NBN3 555 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 CSRNP1Q96S65 589 aa12.71□□□□□ -0.37
CLGN-202ENST00000414773 ZNF541Q9H0D2 1346 aa12.71□□□□□ -0.38
CLGN-202ENST00000414773 ATRNL1Q5VV63 1379 aa12.71□□□□□ -0.38
CLGN-202ENST00000414773 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 EGFRP00533 1210 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 GRM4Q14833 912 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 FOXP4Q8IVH2 680 aaPredicted RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 SYT17Q9BSW7 474 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 IGKV6D-41A0A0C4DH26 115 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 CERKLQ49MI3 558 aaPredicted RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 ZBED3Q96IU2 234 aaPredicted RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLGN-202ENST00000414773 MAD2L2Q9UI95 211 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 CNTNAP1P78357 1384 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 PRPF3O43395 683 aaKnown RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 MYO1BO43795 1136 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 RPS12P25398 132 aaKnown RBP12.7□□□□□ -0.38
CLGN-202ENST00000414773 NOVP48745 357 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 PKN1Q16512 942 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 FAM151AQ8WW52 585 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
CLGN-202ENST00000414773 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
CLGN-202ENST00000414773 ATP2B2Q01814 1243 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms