RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ALX1Q15699 326 aa30.15■■■□□ 2.42
CPNE1-207ENST00000414664 VPS53Q5VIR6 699 aa30.14■■■□□ 2.42
CPNE1-207ENST00000414664 CTU1Q7Z7A3 348 aaKnown RBP30.14■■■□□ 2.42
CPNE1-207ENST00000414664 STK11IPQ8N1F8 1099 aa30.14■■■□□ 2.42
CPNE1-207ENST00000414664 HSPD1P10809 573 aaKnown RBP30.13■■■□□ 2.41
CPNE1-207ENST00000414664 OSBPP22059 807 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 PDE4BQ07343 736 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 PPARAQ07869 468 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 DGKZQ13574 1117 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 TREML2Q5T2D2 321 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 ERICH6BQ5W0A0 696 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 ZNF589Q86UQ0 364 aaPredicted RBP30.13■■■□□ 2.41
CPNE1-207ENST00000414664 KIAA1683Q9H0B3 1180 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 LOC285556D6RIA3 1793 aa30.13■■■□□ 2.41
CPNE1-207ENST00000414664 FOXP2O15409 715 aa30.12■■■□□ 2.41
CPNE1-207ENST00000414664 CYP2C8P10632 490 aa30.12■■■□□ 2.41
CPNE1-207ENST00000414664 ARHGEF6Q15052 776 aa30.12■■■□□ 2.41
CPNE1-207ENST00000414664 C17orf99Q6UX52 265 aa30.12■■■□□ 2.41
CPNE1-207ENST00000414664 ZNF444Q8N0Y2 327 aaPredicted RBP30.12■■■□□ 2.41
CPNE1-207ENST00000414664 ARHGEF10LQ9HCE6 1279 aa30.12■■■□□ 2.41
CPNE1-207ENST00000414664 SMCR8Q8TEV9 937 aaPredicted RBP30.11■■■□□ 2.41
CPNE1-207ENST00000414664 KANSL2Q9H9L4 492 aa30.11■■■□□ 2.41
CPNE1-207ENST00000414664 EMILIN3Q9NT22 766 aa30.11■■■□□ 2.41
CPNE1-207ENST00000414664 RASA1P20936 1047 aa30.1■■■□□ 2.41
CPNE1-207ENST00000414664 ACER1Q8TDN7 264 aa30.1■■■□□ 2.41
CPNE1-207ENST00000414664 RUFY2Q8WXA3 655 aa30.1■■■□□ 2.41
CPNE1-207ENST00000414664 C12orf42Q96LP6 360 aa30.1■■■□□ 2.41
CPNE1-207ENST00000414664 SH2D4AQ9H788 454 aa30.1■■■□□ 2.41
CPNE1-207ENST00000414664 CPA4Q9UI42 421 aa30.1■■■□□ 2.41
CPNE1-207ENST00000414664 ZMYM6O95789 1325 aa30.09■■■□□ 2.41
CPNE1-207ENST00000414664 FGAP02671 866 aa30.09■■■□□ 2.41
CPNE1-207ENST00000414664 HOXA7P31268 230 aaPredicted RBP30.09■■■□□ 2.41
CPNE1-207ENST00000414664 ICA1Q05084 483 aa30.09■■■□□ 2.41
CPNE1-207ENST00000414664 KIF22Q14807 665 aa30.09■■■□□ 2.41
CPNE1-207ENST00000414664 ZYXQ15942 572 aaKnown RBP30.09■■■□□ 2.41
CPNE1-207ENST00000414664 PKN2Q16513 984 aaKnown RBP30.09■■■□□ 2.41
CPNE1-207ENST00000414664 ADGRA2Q96PE1 1338 aa30.09■■■□□ 2.41
CPNE1-207ENST00000414664 IRX3P78415 501 aaPredicted RBP30.08■■■□□ 2.41
CPNE1-207ENST00000414664 CD99L2Q8TCZ2 262 aa30.08■■■□□ 2.41
CPNE1-207ENST00000414664 MCOLN1Q9GZU1 580 aa30.08■■■□□ 2.41
CPNE1-207ENST00000414664 ANAPC4Q9UJX5 808 aa30.08■■■□□ 2.41
CPNE1-207ENST00000414664 ASCC2Q9H1I8 757 aaPredicted RBP30.07■■■□□ 2.4
CPNE1-207ENST00000414664 RAD50Q92878 1312 aa30.06■■■□□ 2.4
CPNE1-207ENST00000414664 PRDM1O75626 825 aa30.06■■■□□ 2.4
CPNE1-207ENST00000414664 A0A1W2PRG0 241 aa30.05■■■□□ 2.4
CPNE1-207ENST00000414664 CHMLP26374 656 aa30.05■■■□□ 2.4
CPNE1-207ENST00000414664 GCLCP48506 637 aaPredicted RBP30.05■■■□□ 2.4
CPNE1-207ENST00000414664 CTDSPL2Q05D32 466 aa30.05■■■□□ 2.4
CPNE1-207ENST00000414664 EFCC1Q9HA90 598 aa30.05■■■□□ 2.4
CPNE1-207ENST00000414664 TMX2Q9Y320 296 aa30.05■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L15C9J2P7 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L13C9JLJ4 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L11C9JVI0 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L18D6R9N7 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L22D6RA61 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L17D6RBQ6 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L19D6RCP7 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L20D6RJB6 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 BCRP11274 1271 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 LACTBP83111 547 aaPredicted RBP30.04■■■□□ 2.4
CPNE1-207ENST00000414664 USP17L24Q0WX57 530 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 DSCC1Q9BVC3 393 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 TRIM17Q9Y577 477 aa30.04■■■□□ 2.4
CPNE1-207ENST00000414664 TSPY3P0CV98 308 aa30.03■■■□□ 2.4
CPNE1-207ENST00000414664 TSPY8P0CW00 308 aa30.03■■■□□ 2.4
CPNE1-207ENST00000414664 EEF2P13639 858 aaKnown RBP30.03■■■□□ 2.4
CPNE1-207ENST00000414664 ATP2B2Q01814 1243 aa30.03■■■□□ 2.4
CPNE1-207ENST00000414664 SIAH1Q8IUQ4 282 aa30.03■■■□□ 2.4
CPNE1-207ENST00000414664 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.03■■■□□ 2.4
CPNE1-207ENST00000414664 PPP4R2Q9NY27 417 aa30.03■■■□□ 2.4
CPNE1-207ENST00000414664 VCAM1P19320 739 aa30.02■■■□□ 2.4
CPNE1-207ENST00000414664 OTOP1Q7RTM1 612 aa30.02■■■□□ 2.4
CPNE1-207ENST00000414664 CLEC10AQ8IUN9 316 aa30.02■■■□□ 2.4
CPNE1-207ENST00000414664 NEDD1Q8NHV4 660 aa30.02■■■□□ 2.4
CPNE1-207ENST00000414664 GTF3C2Q8WUA4 911 aaPredicted RBP30.02■■■□□ 2.4
CPNE1-207ENST00000414664 LPAR1Q92633 364 aa30.02■■■□□ 2.4
CPNE1-207ENST00000414664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.02■■■□□ 2.4
CPNE1-207ENST00000414664 GNRH1P01148 92 aa30.01■■■□□ 2.39
CPNE1-207ENST00000414664 TFAP4Q01664 338 aa30.01■■■□□ 2.39
CPNE1-207ENST00000414664 NYAP2Q9P242 653 aa30.01■■■□□ 2.39
CPNE1-207ENST00000414664 CTNNA3Q9UI47 895 aa30.01■■■□□ 2.39
CPNE1-207ENST00000414664 ZNF213O14771 459 aa30■■■□□ 2.39
CPNE1-207ENST00000414664 ORC4O43929 436 aa30■■■□□ 2.39
CPNE1-207ENST00000414664 PCP11498 1178 aaKnown RBP30■■■□□ 2.39
CPNE1-207ENST00000414664 BMP2KLQ5H9B9 411 aa30■■■□□ 2.39
CPNE1-207ENST00000414664 PPP4R3BQ5MIZ7 849 aa30■■■□□ 2.39
CPNE1-207ENST00000414664 FBXO46Q6PJ61 603 aaPredicted RBP30■■■□□ 2.39
CPNE1-207ENST00000414664 CATSPERGQ6ZRH7 1159 aa30■■■□□ 2.39
CPNE1-207ENST00000414664 ANKRD13CQ8N6S4 541 aa30■■■□□ 2.39
CPNE1-207ENST00000414664 P2RX7Q99572 595 aaKnown RBP30■■■□□ 2.39
CPNE1-207ENST00000414664 VCPKMTQ9H867 229 aa30■■■□□ 2.39
CPNE1-207ENST00000414664 GREB1LQ9C091 1923 aaPredicted RBP29.99■■■□□ 2.39
CPNE1-207ENST00000414664 FGRP09769 529 aa29.99■■■□□ 2.39
CPNE1-207ENST00000414664 HERVK_113P62684 666 aa29.99■■■□□ 2.39
CPNE1-207ENST00000414664 FAM110CQ1W6H9 321 aa29.99■■■□□ 2.39
CPNE1-207ENST00000414664 ABHD8Q96I13 439 aa29.99■■■□□ 2.39
CPNE1-207ENST00000414664 RPAP3Q9H6T3 665 aaPredicted RBP29.99■■■□□ 2.39
CPNE1-207ENST00000414664 GOPCQ9HD26 462 aa29.99■■■□□ 2.39
CPNE1-207ENST00000414664 IGKV6D-41A0A0C4DH26 115 aa29.98■■■□□ 2.39
CPNE1-207ENST00000414664 TSPY2A6NKD2 308 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms