RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 ST14Q9Y5Y6 855 aa9.17□□□□□ -0.94
ATG4C-204ENST00000414558 UPK3BL1B0FP48 263 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 UPK3BL2E5RIL1 263 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 H3BS24 57 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 TLR3O15455 904 aaKnown RBP9.16□□□□□ -0.94
ATG4C-204ENST00000414558 GREM1O60565 184 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 PIWIL2Q8TC59 973 aaKnown RBP9.16□□□□□ -0.94
ATG4C-204ENST00000414558 ZNF296Q8WUU4 475 aaPredicted RBP9.16□□□□□ -0.94
ATG4C-204ENST00000414558 ASIC4Q96FT7 647 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 FMNL2Q96PY5 1086 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 KLHL3Q9UH77 587 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 RNF114Q9Y508 228 aa9.16□□□□□ -0.94
ATG4C-204ENST00000414558 RBM47A0AV96 593 aaKnown RBP9.15□□□□□ -0.94
ATG4C-204ENST00000414558 TNK2Q07912 1038 aa9.15□□□□□ -0.94
ATG4C-204ENST00000414558 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
ATG4C-204ENST00000414558 PPP1R13LQ8WUF5 828 aa9.15□□□□□ -0.94
ATG4C-204ENST00000414558 ZNF76P36508 570 aa9.14□□□□□ -0.95
ATG4C-204ENST00000414558 TXKP42681 527 aa9.14□□□□□ -0.95
ATG4C-204ENST00000414558 LRRN4CLQ8ND94 238 aa9.14□□□□□ -0.95
ATG4C-204ENST00000414558 CCDC74BQ96LY2 380 aa9.14□□□□□ -0.95
ATG4C-204ENST00000414558 ATP13A1Q9HD20 1204 aa9.14□□□□□ -0.95
ATG4C-204ENST00000414558 PAPLNO95428 1278 aa9.13□□□□□ -0.95
ATG4C-204ENST00000414558 TNNI2P48788 182 aa9.13□□□□□ -0.95
ATG4C-204ENST00000414558 LDLRAD1Q5T700 205 aa9.13□□□□□ -0.95
ATG4C-204ENST00000414558 BACH2Q9BYV9 841 aa9.13□□□□□ -0.95
ATG4C-204ENST00000414558 ADAMTS1Q9UHI8 967 aa9.13□□□□□ -0.95
ATG4C-204ENST00000414558 CHURC1-FNTBB4DL54 471 aa9.12□□□□□ -0.95
ATG4C-204ENST00000414558 PHACTR4Q8IZ21 702 aa9.12□□□□□ -0.95
ATG4C-204ENST00000414558 CARS2Q9HA77 564 aaKnown RBP9.12□□□□□ -0.95
ATG4C-204ENST00000414558 BRMS1Q9HCU9 246 aa9.12□□□□□ -0.95
ATG4C-204ENST00000414558 PRDM7Q9NQW5 492 aa9.12□□□□□ -0.95
ATG4C-204ENST00000414558 METTL5Q9NRN9 209 aaKnown RBP9.12□□□□□ -0.95
ATG4C-204ENST00000414558 ZSWIM5Q9P217 1185 aa9.12□□□□□ -0.95
ATG4C-204ENST00000414558 PCDHB14Q9Y5E9 798 aa9.12□□□□□ -0.95
ATG4C-204ENST00000414558 CRKP46108 304 aa9.11□□□□□ -0.95
ATG4C-204ENST00000414558 APOBRQ0VD83 1088 aa9.11□□□□□ -0.95
ATG4C-204ENST00000414558 RNF141Q8WVD5 230 aa9.11□□□□□ -0.95
ATG4C-204ENST00000414558 UBE2FQ969M7 185 aa9.11□□□□□ -0.95
ATG4C-204ENST00000414558 Q96M66 194 aa9.11□□□□□ -0.95
ATG4C-204ENST00000414558 TRIT1Q9H3H1 467 aaKnown RBP9.11□□□□□ -0.95
ATG4C-204ENST00000414558 KCNH3Q9ULD8 1083 aa9.11□□□□□ -0.95
ATG4C-204ENST00000414558 DNAJA2O60884 412 aa9.1□□□□□ -0.95
ATG4C-204ENST00000414558 ATE1O95260 518 aa9.1□□□□□ -0.95
ATG4C-204ENST00000414558 TMPRSS7Q7RTY8 843 aa9.1□□□□□ -0.95
ATG4C-204ENST00000414558 FLAD1Q8NFF5 587 aa9.1□□□□□ -0.95
ATG4C-204ENST00000414558 UBP1Q9NZI7 540 aa9.1□□□□□ -0.95
ATG4C-204ENST00000414558 GMIPQ9P107 970 aa9.1□□□□□ -0.95
ATG4C-204ENST00000414558 CHMP4BP1P59074 171 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 FANCCQ00597 558 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 SEZ6Q53EL9 994 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 KIAA0825Q8IV33 1275 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 REXO1Q8N1G1 1221 aaKnown RBP9.09□□□□□ -0.95
ATG4C-204ENST00000414558 DTWD2Q8NBA8 298 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 BAHD1Q8TBE0 780 aaPredicted RBP9.09□□□□□ -0.95
ATG4C-204ENST00000414558 KREMEN1Q96MU8 473 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 SPON2Q9BUD6 331 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 NT5C1AQ9BXI3 368 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 ASPNQ9BXN1 380 aa9.09□□□□□ -0.95
ATG4C-204ENST00000414558 VAMP1P23763 118 aa9.08□□□□□ -0.96
ATG4C-204ENST00000414558 GBP1P32455 592 aa9.08□□□□□ -0.96
ATG4C-204ENST00000414558 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
ATG4C-204ENST00000414558 USP48Q86UV5 1035 aa9.08□□□□□ -0.96
ATG4C-204ENST00000414558 CCDC120Q96HB5 630 aa9.08□□□□□ -0.96
ATG4C-204ENST00000414558 KIF2CQ99661 725 aa9.08□□□□□ -0.96
ATG4C-204ENST00000414558 EHMT1Q9H9B1 1298 aa9.08□□□□□ -0.96
ATG4C-204ENST00000414558 GPATCH2Q9NW75 528 aa9.08□□□□□ -0.96
ATG4C-204ENST00000414558 SLC22A31A6NKX4 558 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 RGS13O14921 159 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 RAG1P15918 1043 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 ZNF165P49910 485 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 ARSHQ5FYA8 562 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 NKD1Q969G9 470 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 RNF34Q969K3 372 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 GPR62Q9BZJ7 368 aa9.07□□□□□ -0.96
ATG4C-204ENST00000414558 MCM4P33991 863 aa9.06□□□□□ -0.96
ATG4C-204ENST00000414558 GK5Q6ZS86 529 aa9.06□□□□□ -0.96
ATG4C-204ENST00000414558 FAM168AQ92567 244 aa9.06□□□□□ -0.96
ATG4C-204ENST00000414558 KRTAP9-2Q9BYQ4 174 aa9.06□□□□□ -0.96
ATG4C-204ENST00000414558 DUSP15Q9H1R2 295 aaPredicted RBP9.06□□□□□ -0.96
ATG4C-204ENST00000414558 CTNND2Q9UQB3 1225 aa9.06□□□□□ -0.96
ATG4C-204ENST00000414558 TPP2P29144 1249 aaPredicted RBP9.05□□□□□ -0.96
ATG4C-204ENST00000414558 OVOS1Q6IE37 1185 aa9.05□□□□□ -0.96
ATG4C-204ENST00000414558 SLITRK4Q8IW52 837 aa9.05□□□□□ -0.96
ATG4C-204ENST00000414558 ALPK1Q96QP1 1244 aa9.05□□□□□ -0.96
ATG4C-204ENST00000414558 RBAK-RBAKDNI3L0D1 243 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 RECKO95980 971 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 SRFP11831 508 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 AFMP43652 599 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 RNF4P78317 190 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 CLCQ05315 142 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 GAB4Q2WGN9 574 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 LRRFIP1Q32MZ4 808 aaKnown RBP9.04□□□□□ -0.96
ATG4C-204ENST00000414558 CDCP2Q5VXM1 449 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 CREG2Q8IUH2 290 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 EAF1Q96JC9 268 aaPredicted RBP9.04□□□□□ -0.96
ATG4C-204ENST00000414558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG4C-204ENST00000414558 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
ATG4C-204ENST00000414558 SCAMP3O14828 347 aaKnown RBP9.03□□□□□ -0.96
ATG4C-204ENST00000414558 LRRN2O75325 713 aa9.03□□□□□ -0.96
ATG4C-204ENST00000414558 ESR1P03372 595 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms