RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 RPS6KA4O75676 772 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 GSPT1P15170 499 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 EN1Q05925 392 aaPredicted RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 TBC1D9BQ66K14 1250 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 LMBR1LQ6UX01 489 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 PLEKHM2Q8IWE5 1019 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 SSH3Q8TE77 659 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 DNAJC25Q9H1X3 360 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 TRMT112Q9UI30 125 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 NSFL1CQ9UNZ2 370 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 TNS1Q9HBL0 1735 aaKnown RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 MASP1P48740 699 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 CDKN1CP49918 316 aaPredicted RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 CHMP4BP1P59074 171 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 FOXO4P98177 505 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 ZNF771Q7L3S4 317 aaPredicted RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 DEFB132Q7Z7B7 95 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 NDUFAF2Q8N183 169 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 NLRP7Q8WX94 980 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 INTS4Q96HW7 963 aaKnown RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 ZNF594Q96JF6 807 aaPredicted RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 RNF19AQ9NV58 838 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 C4AP0C0L4 1744 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 GOLGA6L6A8MZA4 724 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 ERVV-1B6SEH8 477 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L15C9J2P7 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L10C9JJH3 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L13C9JLJ4 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L11C9JVI0 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L21D6R901 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L18D6R9N7 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L22D6RA61 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L17D6RBQ6 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L19D6RCP7 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L20D6RJB6 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 ADCY5O95622 1261 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 RPN1P04843 607 aaKnown RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 GEMIN4P57678 1058 aaKnown RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 USP17L24Q0WX57 530 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
SNHG3-201ENST00000413987 ZNF34Q8IZ26 560 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 TMEM51Q9NW97 253 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 VTI1BQ9UEU0 232 aa10.8□□□□□ -0.68
SNHG3-201ENST00000413987 A0A1W2PRQ8 180 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 CCDC66A2RUB6 948 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
SNHG3-201ENST00000413987 RACK1P63244 317 aaKnown RBP10.79□□□□□ -0.68
SNHG3-201ENST00000413987 ZNF394Q53GI3 561 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 C14orf80Q86SX3 495 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 KANSL2Q9H9L4 492 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 HMX1Q9NP08 348 aaPredicted RBP10.79□□□□□ -0.68
SNHG3-201ENST00000413987 TAGLN3Q9UI15 199 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 PCDHGB7Q9Y5F8 929 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 MRVI1Q9Y6F6 885 aa10.79□□□□□ -0.68
SNHG3-201ENST00000413987 MAP3K7O43318 606 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 CUL4AQ13619 759 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 TAF11Q15544 211 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 TUSC1Q2TAM9 212 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 ARSHQ5FYA8 562 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 CCDC183Q5T5S1 534 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 RC3H1Q5TC82 1133 aaKnown RBP10.78□□□□□ -0.68
SNHG3-201ENST00000413987 ZBTB38Q8NAP3 1195 aaPredicted RBP10.78□□□□□ -0.68
SNHG3-201ENST00000413987 C1orf216Q8TAB5 229 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 FAM200AQ8TCP9 573 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 CDHR1Q96JP9 859 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 FBXO2Q9UK22 296 aaPredicted RBP10.78□□□□□ -0.68
SNHG3-201ENST00000413987 BCORQ6W2J9 1755 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 IRS4O14654 1257 aaPredicted RBP10.78□□□□□ -0.68
SNHG3-201ENST00000413987 ZPR1O75312 459 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 LMNB1P20700 586 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 RFC4P35249 363 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 GPSM2P81274 684 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 MTX1Q13505 466 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 SEPT2Q15019 361 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 ALFQ53S48 1182 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 TMC4Q7Z404 712 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 JAMLQ86YT9 394 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 KIAA1524Q8TCG1 905 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 FRS2Q8WU20 508 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 TTC12Q9H892 705 aaPredicted RBP10.78□□□□□ -0.68
SNHG3-201ENST00000413987 USP25Q9UHP3 1055 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 DDX41Q9UJV9 622 aaKnown RBP10.78□□□□□ -0.68
SNHG3-201ENST00000413987 UBR3Q6ZT12 1888 aa10.78□□□□□ -0.68
SNHG3-201ENST00000413987 SCN7AQ01118 1682 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 C21orf2O43822 256 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 PCCAP05165 728 aaPredicted RBP10.77□□□□□ -0.68
SNHG3-201ENST00000413987 TRIM28Q13263 835 aaKnown RBP10.77□□□□□ -0.68
SNHG3-201ENST00000413987 SLC27A3Q5K4L6 730 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 ERAP2Q6P179 960 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 UBE2Q1Q7Z7E8 422 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 ANKRD13BQ86YJ7 626 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 HELQQ8TDG4 1101 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 NARFQ9UHQ1 456 aa10.77□□□□□ -0.68
SNHG3-201ENST00000413987 AK9Q5TCS8 1911 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms