RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NDUFB9Q9Y6M9 179 aa11.75□□□□□ -0.53
RFFL-203ENST00000413582 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 GLRX3O76003 335 aaKnown RBP11.74□□□□□ -0.53
RFFL-203ENST00000413582 BAG3O95817 575 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 IGHA2P01877 340 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 CCNA1P78396 465 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 GRB14Q14449 540 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 NAA16Q6N069 864 aaPredicted RBP11.74□□□□□ -0.53
RFFL-203ENST00000413582 TRPV1Q8NER1 839 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 MAFAQ8NHW3 353 aaPredicted RBP11.74□□□□□ -0.53
RFFL-203ENST00000413582 EDC3Q96F86 508 aaKnown RBP11.74□□□□□ -0.53
RFFL-203ENST00000413582 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 CWC22Q9HCG8 908 aaKnown RBP11.74□□□□□ -0.53
RFFL-203ENST00000413582 PRKAG2Q9UGJ0 569 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
RFFL-203ENST00000413582 USP17L15C9J2P7 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L13C9JLJ4 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L11C9JVI0 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L18D6R9N7 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L22D6RA61 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L17D6RBQ6 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L19D6RCP7 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L20D6RJB6 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 GH2P01242 217 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 GNAI3P08754 354 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 UQCRFS1P1P0C7P4 283 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 CYBAP13498 195 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 VCAM1P19320 739 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 PTPREP23469 700 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 CYP2C19P33261 490 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 SHHQ15465 462 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 ZYXQ15942 572 aaKnown RBP11.73□□□□□ -0.53
RFFL-203ENST00000413582 WDR78Q5VTH9 848 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 LBX2Q6XYB7 198 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 FEZ1Q99689 392 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 TTYH1Q9H313 450 aaPredicted RBP11.73□□□□□ -0.53
RFFL-203ENST00000413582 SEMA6BQ9H3T3 888 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 SNRKQ9NRH2 765 aa11.73□□□□□ -0.53
RFFL-203ENST00000413582 SAP30BPQ9UHR5 308 aaKnown RBP11.73□□□□□ -0.53
RFFL-203ENST00000413582 NCOR1O75376 2440 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 MUC3AQ02505 3323 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 HLA-DOAP06340 250 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 CT47B1P0C2W7 299 aaPredicted RBP11.72□□□□□ -0.53
RFFL-203ENST00000413582 CNGA1P29973 690 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 ATP2B2Q01814 1243 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 SNX17Q15036 470 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 TRMT2AQ8IZ69 625 aaKnown RBP11.72□□□□□ -0.53
RFFL-203ENST00000413582 MYLIPQ8WY64 445 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 KIAA1683Q9H0B3 1180 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 BTBD7Q9P203 1132 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
RFFL-203ENST00000413582 PNMA6EA0A0J9YXQ4 647 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
RFFL-203ENST00000413582 CYP2E1P05181 493 aaPredicted RBP11.71□□□□□ -0.53
RFFL-203ENST00000413582 USP14P54578 494 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 SMAD3P84022 425 aaKnown RBP11.71□□□□□ -0.53
RFFL-203ENST00000413582 TRIM60Q495X7 471 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 GJC2Q5T442 439 aaPredicted RBP11.71□□□□□ -0.53
RFFL-203ENST00000413582 TATDN1Q6P1N9 297 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 ACER1Q8TDN7 264 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.53
RFFL-203ENST00000413582 PDLIM7Q9NR12 457 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.53
RFFL-203ENST00000413582 MYO9BQ13459 2157 aa11.71□□□□□ -0.54
RFFL-203ENST00000413582 NAV1Q8NEY1 1877 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 KBTBD13C9JR72 458 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
RFFL-203ENST00000413582 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 SLC39A5Q6ZMH5 540 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 BADQ92934 168 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 DBNDD2Q9BQY9 259 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 EHD4Q9H223 541 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
RFFL-203ENST00000413582 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 PARP14Q460N5 1801 aa11.7□□□□□ -0.54
RFFL-203ENST00000413582 TRIM43BA6NCK2 446 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 IGSF3O75054 1194 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 FOSL2P15408 326 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 ADORA2AP29274 412 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 ZAP70P43403 619 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 G3BP1Q13283 466 aaKnown RBP eCLIP11.69□□□□□ -0.54
RFFL-203ENST00000413582 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 ANO1Q5XXA6 986 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 SH3RF1Q7Z6J0 888 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 ARRDC4Q8NCT1 418 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 TRIM43Q96BQ3 446 aaPredicted RBP11.69□□□□□ -0.54
RFFL-203ENST00000413582 RPAP3Q9H6T3 665 aaPredicted RBP11.69□□□□□ -0.54
RFFL-203ENST00000413582 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 SERPINB13Q9UIV8 391 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
RFFL-203ENST00000413582 TMEM265A0A087WTH1 108 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms