RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-233	ENST00000412685	PCDHA5	Q9Y5H7	936 aa		18.89	■□□□□ 0.62
HCG18-233	ENST00000412685	TRIM75P	A6NK02	468 aa		18.89	■□□□□ 0.61
HCG18-233	ENST00000412685	IGSF3	O75054	1194 aa		18.89	■□□□□ 0.61
HCG18-233	ENST00000412685	SMC2	O95347	1197 aa		18.89	■□□□□ 0.61
HCG18-233	ENST00000412685	MDM2	Q00987	491 aa	Predicted RBP	18.89	■□□□□ 0.61
HCG18-233	ENST00000412685	SRBD1	Q8N5C6	995 aa	Known RBP	18.89	■□□□□ 0.61
HCG18-233	ENST00000412685	XPO4	Q9C0E2	1151 aa	Known RBP	18.89	■□□□□ 0.61
HCG18-233	ENST00000412685	HOOK1	Q9UJC3	728 aa	Known RBP	18.89	■□□□□ 0.61
HCG18-233	ENST00000412685	POLR2D	O15514	142 aa	Known RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	SLC4A8	Q2Y0W8	1093 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	EARS2	Q5JPH6	523 aa	Known RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	ZNF804A	Q7Z570	1209 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	FOXN1	O15353	648 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	LMOD1	P29536	600 aa	Predicted RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	USP5	P45974	858 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	C12orf60	Q5U649	245 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	RPGR	Q92834	1020 aa	Known RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	BRMS1	Q9HCU9	246 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	ONECUT3	O60422	494 aa	Predicted RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	MYL5	Q02045	173 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	RCSD1	Q6JBY9	416 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	SEPT12	Q8IYM1	358 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	GPR101	Q96P66	508 aa	Predicted RBP	18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	HSD3B7	Q9H2F3	369 aa		18.88	■□□□□ 0.61
HCG18-233	ENST00000412685	GSDMD	P57764	484 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	GSTO1	P78417	241 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	POSTN	Q15063	836 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	DIXDC1	Q155Q3	683 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	NPY5R	Q15761	445 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	GRIK5	Q16478	980 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	C15orf52	Q6ZUT6	534 aa	Known RBP	18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	CSRNP2	Q9H175	543 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	IMPACT	Q9P2X3	320 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	AFF2	P51816	1311 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	SKIL	P12757	684 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	OLFM4	Q6UX06	510 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	SERTAD1	Q9UHV2	236 aa		18.87	■□□□□ 0.61
HCG18-233	ENST00000412685	GPSM2	P81274	684 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	TNFRSF25	Q93038	417 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	BAG3	O95817	575 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	CCZ1B	P86790	482 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	CCZ1	P86791	482 aa	Predicted RBP	18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	TFAP4	Q01664	338 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	CRY2	Q49AN0	593 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	USP49	Q70CQ1	688 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	CERK	Q8TCT0	537 aa		18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	C16orf45	Q96MC5	204 aa	Predicted RBP	18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	NOL10	Q9BSC4	688 aa	Known RBP	18.86	■□□□□ 0.61
HCG18-233	ENST00000412685	SCG2	P13521	617 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	ATP1A3	P13637	1013 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	GYS1	P13807	737 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	BMP6	P22004	513 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	KIF5B	P33176	963 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.85	■□□□□ 0.61	1e-8	■■■□□ 16.5
HCG18-233	ENST00000412685	PPP4C	P60510	307 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	FANCC	Q00597	558 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	PDILT	Q8N807	584 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	BMP15	O95972	392 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	NT5C2	P49902	561 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	RBM10	P98175	930 aa	Known RBP	18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	NT5DC1	Q5TFE4	455 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	DYNLL2	Q96FJ2	89 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	KAT14	Q9H8E8	782 aa		18.85	■□□□□ 0.61
HCG18-233	ENST00000412685	ROBO3	Q96MS0	1386 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	ACTN4	O43707	911 aa	Known RBP	18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	UFL1	O94874	794 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	ST5	P78524	1137 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	NOM1	Q5C9Z4	860 aa	Known RBP	18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	TMC6	Q7Z403	805 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	DGKH	Q86XP1	1220 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	IL17RB	Q9NRM6	502 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	MAN1B1	Q9UKM7	699 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	EP400	Q96L91	3159 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	WNT7A	O00755	349 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	LDHC	P07864	332 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	PRR29	P0C7W0	189 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	PFKFB3	Q16875	520 aa	Predicted RBP	18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	KANK3	Q6NY19	840 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	AMOTL1	Q8IY63	956 aa		18.84	■□□□□ 0.61
HCG18-233	ENST00000412685	UBR3	Q6ZT12	1888 aa		18.83	■□□□□ 0.61
HCG18-233	ENST00000412685	SERPINB2	P05120	415 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	TPD52L1	Q16890	204 aa	Predicted RBP	18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	TGFBRAP1	Q8WUH2	860 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	FERMT2	Q96AC1	680 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	MKNK2	Q9HBH9	465 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	CD209	Q9NNX6	404 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	SARS	P49591	514 aa	Known RBP	18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	NLRP5	P59047	1200 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	TTC38	Q5R3I4	469 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	GRAMD1C	Q8IYS0	662 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	SMARCE1	Q969G3	411 aa		18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	TRPC5	Q9UL62	973 aa	Predicted RBP	18.83	■□□□□ 0.6
HCG18-233	ENST00000412685	ZNF174	Q15697	407 aa		18.82	■□□□□ 0.6
HCG18-233	ENST00000412685	PNMA1	Q8ND90	353 aa		18.82	■□□□□ 0.6
HCG18-233	ENST00000412685	ANKS1A	Q92625	1134 aa		18.82	■□□□□ 0.6

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