RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 COA1Q9GZY4 146 aa23.21■■□□□ 1.31
SUMO3-204ENST00000411651 TUBE1Q9UJT0 475 aa23.21■■□□□ 1.31
SUMO3-204ENST00000411651 RGPD3A6NKT7 1758 aaPredicted RBP23.2■■□□□ 1.3
SUMO3-204ENST00000411651 RGPD4Q7Z3J3 1758 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 GNAQP50148 359 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 FAM47AQ5JRC9 791 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 CCDC82Q8N4S0 544 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 NPR1P16066 1061 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 BTDP43251 543 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 GRIK5Q16478 980 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 QSER1Q2KHR3 1735 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 MRFAP1L1Q96HT8 127 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 KAT14Q9H8E8 782 aa23.2■■□□□ 1.3
SUMO3-204ENST00000411651 FBXO2Q9UK22 296 aaPredicted RBP23.2■■□□□ 1.3
SUMO3-204ENST00000411651 SRPRBQ9Y5M8 271 aaKnown RBP23.2■■□□□ 1.3
SUMO3-204ENST00000411651 V9GY48 417 aaPredicted RBP23.2■■□□□ 1.3
SUMO3-204ENST00000411651 BECN2A8MW95 431 aa23.19■■□□□ 1.3
SUMO3-204ENST00000411651 NLRP12P59046 1061 aa23.19■■□□□ 1.3
SUMO3-204ENST00000411651 TFAP4Q01664 338 aa23.19■■□□□ 1.3
SUMO3-204ENST00000411651 MFSD14BQ5SR56 506 aa23.19■■□□□ 1.3
SUMO3-204ENST00000411651 SLC51AQ86UW1 340 aa23.19■■□□□ 1.3
SUMO3-204ENST00000411651 DHX40Q8IX18 779 aaKnown RBP23.19■■□□□ 1.3
SUMO3-204ENST00000411651 SRGNP10124 158 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 ALDH1B1P30837 517 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 EVX2Q03828 476 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 NR5A1Q13285 461 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 SRBD1Q8N5C6 995 aaKnown RBP23.18■■□□□ 1.3
SUMO3-204ENST00000411651 PIBF1Q8WXW3 757 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 GPR101Q96P66 508 aaPredicted RBP23.18■■□□□ 1.3
SUMO3-204ENST00000411651 TRIM5Q9C035 493 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 MKNK2Q9HBH9 465 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 SH3GLB2Q9NR46 395 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 FAM13BQ9NYF5 915 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 HOOK1Q9UJC3 728 aaKnown RBP23.18■■□□□ 1.3
SUMO3-204ENST00000411651 FOCADQ5VW36 1801 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 TRAPPC10P48553 1259 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 TERF1P54274 439 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 PFKFB3Q16875 520 aaPredicted RBP23.18■■□□□ 1.3
SUMO3-204ENST00000411651 C16orf86Q6ZW13 317 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 TGFBRAP1Q8WUH2 860 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 TNFRSF25Q93038 417 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 SHISA4Q96DD7 197 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 VPS54Q9P1Q0 977 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 KCNH3Q9ULD8 1083 aa23.18■■□□□ 1.3
SUMO3-204ENST00000411651 NMT2O60551 498 aa23.17■■□□□ 1.3
SUMO3-204ENST00000411651 SCG2P13521 617 aa23.17■■□□□ 1.3
SUMO3-204ENST00000411651 PDE6BP35913 854 aa23.17■■□□□ 1.3
SUMO3-204ENST00000411651 ZNF827Q17R98 1081 aa23.17■■□□□ 1.3
SUMO3-204ENST00000411651 ZNF444Q8N0Y2 327 aaPredicted RBP23.17■■□□□ 1.3
SUMO3-204ENST00000411651 IL17RBQ9NRM6 502 aa23.17■■□□□ 1.3
SUMO3-204ENST00000411651 TRIM75PA6NK02 468 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 RHBDL3P58872 404 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 GRM4Q14833 912 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 PNMA1Q8ND90 353 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 OXER1Q8TDS5 423 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 C6orf229H3BNL8 230 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 NPY5RQ15761 445 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 KRBA2Q6ZNG9 492 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 TEX11Q8IYF3 940 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 LZTS2Q9BRK4 669 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 CABP5Q9NP86 173 aa23.16■■□□□ 1.3
SUMO3-204ENST00000411651 TSPY3P0CV98 308 aa23.15■■□□□ 1.3
SUMO3-204ENST00000411651 TSPY8P0CW00 308 aa23.15■■□□□ 1.3
SUMO3-204ENST00000411651 CALML3P27482 149 aa23.15■■□□□ 1.3
SUMO3-204ENST00000411651 COL23A1Q86Y22 540 aaPredicted RBP23.15■■□□□ 1.3
SUMO3-204ENST00000411651 FERMT2Q96AC1 680 aa23.15■■□□□ 1.3
SUMO3-204ENST00000411651 CLIC6Q96NY7 704 aa23.15■■□□□ 1.3
SUMO3-204ENST00000411651 PCDHB6Q9Y5E3 794 aa23.15■■□□□ 1.3
SUMO3-204ENST00000411651 FLT1P17948 1338 aa23.15■■□□□ 1.3
SUMO3-204ENST00000411651 IKBKBO14920 756 aa23.14■■□□□ 1.3
SUMO3-204ENST00000411651 RASA1P20936 1047 aa23.14■■□□□ 1.3
SUMO3-204ENST00000411651 KANK3Q6NY19 840 aa23.14■■□□□ 1.3
SUMO3-204ENST00000411651 SMTNL1A8MU46 457 aa23.14■■□□□ 1.29
SUMO3-204ENST00000411651 NOVP48745 357 aa23.14■■□□□ 1.29
SUMO3-204ENST00000411651 C10orf71Q711Q0 1435 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 SNED1Q8TER0 1413 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 PLIN4Q96Q06 1357 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 GALNT17Q6IS24 598 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 MAPKAPK5Q8IW41 473 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 NEDD1Q8NHV4 660 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 DYNLL2Q96FJ2 89 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 SPTLC3Q9NUV7 552 aa23.13■■□□□ 1.29
SUMO3-204ENST00000411651 MYO1BO43795 1136 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 PLCD1P51178 756 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 TPM4P67936 248 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 CNNM3Q8NE01 707 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 MASTLQ96GX5 879 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 CCDC34Q96HJ3 373 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 TTC12Q9H892 705 aaPredicted RBP23.12■■□□□ 1.29
SUMO3-204ENST00000411651 SMARCA1P28370 1054 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 NT5DC1Q5TFE4 455 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 MPNDQ8N594 471 aa23.12■■□□□ 1.29
SUMO3-204ENST00000411651 ZC3H12CQ9C0D7 883 aaKnown RBP23.12■■□□□ 1.29
SUMO3-204ENST00000411651 APBA3O96018 575 aa23.11■■□□□ 1.29
SUMO3-204ENST00000411651 CDK8P49336 464 aa23.11■■□□□ 1.29
SUMO3-204ENST00000411651 AOPEPQ8N6M6 819 aa23.11■■□□□ 1.29
SUMO3-204ENST00000411651 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
SUMO3-204ENST00000411651 PARP3Q9Y6F1 533 aa23.11■■□□□ 1.29
SUMO3-204ENST00000411651 COL11A2P13942 1736 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms