RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
NOD1-202ENST00000411552 TMOD4Q9NZQ9 345 aa19.48■□□□□ 0.71
NOD1-202ENST00000411552 CCDC171Q6TFL3 1326 aa19.48■□□□□ 0.71
NOD1-202ENST00000411552 RASA1P20936 1047 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 PPARAQ07869 468 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 C17orf99Q6UX52 265 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 CLEC10AQ8IUN9 316 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 CD99L2Q8TCZ2 262 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 FEZ1Q99689 392 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 EMILIN3Q9NT22 766 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 CPA4Q9UI42 421 aa19.47■□□□□ 0.71
NOD1-202ENST00000411552 HSPD1P10809 573 aaKnown RBP19.46■□□□□ 0.71
NOD1-202ENST00000411552 CAP1Q01518 475 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 ALX1Q15699 326 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 ZYXQ15942 572 aaKnown RBP19.46■□□□□ 0.71
NOD1-202ENST00000411552 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 SKAP1Q86WV1 359 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 ERO1AQ96HE7 468 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 MCOLN1Q9GZU1 580 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 KIAA1683Q9H0B3 1180 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 MKNK2Q9HBH9 465 aa19.46■□□□□ 0.71
NOD1-202ENST00000411552 GREB1LQ9C091 1923 aaPredicted RBP19.46■□□□□ 0.71
NOD1-202ENST00000411552 A0A1W2PRG0 241 aa19.45■□□□□ 0.7
NOD1-202ENST00000411552 PRDM1O75626 825 aa19.45■□□□□ 0.7
NOD1-202ENST00000411552 MFAP1P55081 439 aaKnown RBP19.45■□□□□ 0.7
NOD1-202ENST00000411552 PABPC4Q13310 644 aaKnown RBP eCLIP19.45■□□□□ 0.7
NOD1-202ENST00000411552 PNMA3Q9UL41 463 aa19.45■□□□□ 0.7
NOD1-202ENST00000411552 HTTP42858 3142 aa19.45■□□□□ 0.7
NOD1-202ENST00000411552 ZSWIM8A7E2V4 1837 aa19.44■□□□□ 0.7
NOD1-202ENST00000411552 FGAP02671 866 aa19.44■□□□□ 0.7
NOD1-202ENST00000411552 USP14P54578 494 aa19.44■□□□□ 0.7
NOD1-202ENST00000411552 ICA1Q05084 483 aa19.44■□□□□ 0.7
NOD1-202ENST00000411552 SIAH1Q8IUQ4 282 aa19.44■□□□□ 0.7
NOD1-202ENST00000411552 SMCR8Q8TEV9 937 aaPredicted RBP19.44■□□□□ 0.7
NOD1-202ENST00000411552 C12orf42Q96LP6 360 aa19.44■□□□□ 0.7
NOD1-202ENST00000411552 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.44■□□□□ 0.7
NOD1-202ENST00000411552 ASCC2Q9H1I8 757 aaPredicted RBP19.44■□□□□ 0.7
NOD1-202ENST00000411552 ZNF287Q9HBT7 754 aa19.44■□□□□ 0.7
NOD1-202ENST00000411552 SLC3A2P08195 630 aaKnown RBP19.43■□□□□ 0.7
NOD1-202ENST00000411552 BCRP11274 1271 aa19.43■□□□□ 0.7
NOD1-202ENST00000411552 OSBPP22059 807 aa19.43■□□□□ 0.7
NOD1-202ENST00000411552 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
NOD1-202ENST00000411552 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
NOD1-202ENST00000411552 PDE4BQ07343 736 aa19.43■□□□□ 0.7
NOD1-202ENST00000411552 KANSL2Q9H9L4 492 aa19.43■□□□□ 0.7
NOD1-202ENST00000411552 ZMYM6O95789 1325 aa19.43■□□□□ 0.7
NOD1-202ENST00000411552 LACTBP83111 547 aaPredicted RBP19.42■□□□□ 0.7
NOD1-202ENST00000411552 OTOP1Q7RTM1 612 aa19.42■□□□□ 0.7
NOD1-202ENST00000411552 ZNF444Q8N0Y2 327 aaPredicted RBP19.42■□□□□ 0.7
NOD1-202ENST00000411552 ARHGAP39Q9C0H5 1083 aa19.42■□□□□ 0.7
NOD1-202ENST00000411552 IL25Q9H293 177 aa19.42■□□□□ 0.7
NOD1-202ENST00000411552 ARHGEF10LQ9HCE6 1279 aa19.42■□□□□ 0.7
NOD1-202ENST00000411552 ANAPC4Q9UJX5 808 aa19.42■□□□□ 0.7
NOD1-202ENST00000411552 TRIM17Q9Y577 477 aa19.42■□□□□ 0.7
NOD1-202ENST00000411552 EEF2P13639 858 aaKnown RBP19.41■□□□□ 0.7
NOD1-202ENST00000411552 VCAM1P19320 739 aa19.41■□□□□ 0.7
NOD1-202ENST00000411552 CHMLP26374 656 aa19.41■□□□□ 0.7
NOD1-202ENST00000411552 IRX3P78415 501 aaPredicted RBP19.41■□□□□ 0.7
NOD1-202ENST00000411552 ABHD8Q96I13 439 aa19.41■□□□□ 0.7
NOD1-202ENST00000411552 EFCC1Q9HA90 598 aa19.41■□□□□ 0.7
NOD1-202ENST00000411552 INCENPQ9NQS7 918 aa19.41■□□□□ 0.7
NOD1-202ENST00000411552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.41■□□□□ 0.7
NOD1-202ENST00000411552 TACC3Q9Y6A5 838 aa19.41■□□□□ 0.7
NOD1-202ENST00000411552 ATP2B2Q01814 1243 aa19.4■□□□□ 0.7
NOD1-202ENST00000411552 KIF22Q14807 665 aa19.4■□□□□ 0.7
NOD1-202ENST00000411552 PKN2Q16513 984 aaKnown RBP19.4■□□□□ 0.7
NOD1-202ENST00000411552 KIAA1755Q5JYT7 1200 aa19.4■□□□□ 0.7
NOD1-202ENST00000411552 ANKRD13CQ8N6S4 541 aa19.4■□□□□ 0.7
NOD1-202ENST00000411552 P2RX7Q99572 595 aaKnown RBP19.4■□□□□ 0.7
NOD1-202ENST00000411552 TMX2Q9Y320 296 aa19.4■□□□□ 0.7
NOD1-202ENST00000411552 IGKV6D-41A0A0C4DH26 115 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L15C9J2P7 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L13C9JLJ4 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L11C9JVI0 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L18D6R9N7 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L22D6RA61 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L17D6RBQ6 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L19D6RCP7 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L20D6RJB6 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 ECM2O94769 699 aaPredicted RBP19.39■□□□□ 0.69
NOD1-202ENST00000411552 CTGFP29279 349 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 GCLCP48506 637 aaPredicted RBP19.39■□□□□ 0.69
NOD1-202ENST00000411552 HAND2P61296 217 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 USP17L24Q0WX57 530 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 FAM47AQ5JRC9 791 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 RPAP3Q9H6T3 665 aaPredicted RBP19.39■□□□□ 0.69
NOD1-202ENST00000411552 SH2D4AQ9H788 454 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 PLIN4Q96Q06 1357 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 LAMA4Q16363 1823 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 MGAMO43451 1857 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 MYH4Q9Y623 1939 aa19.39■□□□□ 0.69
NOD1-202ENST00000411552 TSPY3P0CV98 308 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 TSPY8P0CW00 308 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 HERVK_113P62684 666 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 ARHGEF6Q15052 776 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 FBXO46Q6PJ61 603 aaPredicted RBP19.38■□□□□ 0.69
NOD1-202ENST00000411552 NEDD1Q8NHV4 660 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 RAD50Q92878 1312 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 TRIM47Q96LD4 638 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 DSCC1Q9BVC3 393 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms