RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 ALX1Q15699 326 aa28.07■■■□□ 2.08
R3HCC1-202ENST00000411463 CASP8AP2Q9UKL3 1982 aa28.06■■■□□ 2.08
R3HCC1-202ENST00000411463 SLC3A2P08195 630 aaKnown RBP28.06■■■□□ 2.08
R3HCC1-202ENST00000411463 PABPC4Q13310 644 aaKnown RBP eCLIP28.06■■■□□ 2.088e-7■□□□□ 8.3
R3HCC1-202ENST00000411463 USP17L2Q6R6M4 530 aa28.06■■■□□ 2.08
R3HCC1-202ENST00000411463 ACER1Q8TDN7 264 aa28.06■■■□□ 2.08
R3HCC1-202ENST00000411463 RASA1P20936 1047 aa28.05■■■□□ 2.08
R3HCC1-202ENST00000411463 KIAA1683Q9H0B3 1180 aa28.05■■■□□ 2.08
R3HCC1-202ENST00000411463 FGAP02671 866 aa28.04■■■□□ 2.08
R3HCC1-202ENST00000411463 USP14P54578 494 aa28.04■■■□□ 2.08
R3HCC1-202ENST00000411463 CTU1Q7Z7A3 348 aaKnown RBP28.04■■■□□ 2.08
R3HCC1-202ENST00000411463 EMILIN3Q9NT22 766 aa28.04■■■□□ 2.08
R3HCC1-202ENST00000411463 CPA4Q9UI42 421 aa28.04■■■□□ 2.08
R3HCC1-202ENST00000411463 PNMA3Q9UL41 463 aa28.04■■■□□ 2.08
R3HCC1-202ENST00000411463 PDE4BQ07343 736 aa28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 ZYXQ15942 572 aaKnown RBP28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 C17orf99Q6UX52 265 aa28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 SKAP1Q86WV1 359 aa28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 ZNF444Q8N0Y2 327 aaPredicted RBP28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 ERO1AQ96HE7 468 aa28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 ADGRA2Q96PE1 1338 aa28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 PTPRFP10586 1907 aa28.03■■■□□ 2.08
R3HCC1-202ENST00000411463 PRDM1O75626 825 aa28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 ICA1Q05084 483 aa28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 ERICH6BQ5W0A0 696 aa28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 KANSL2Q9H9L4 492 aa28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 A0A1W2PRG0 241 aa28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 CLEC10AQ8IUN9 316 aa28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 SMCR8Q8TEV9 937 aaPredicted RBP28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 C12orf42Q96LP6 360 aa28.02■■■□□ 2.08
R3HCC1-202ENST00000411463 OSBPP22059 807 aa28.01■■■□□ 2.07
R3HCC1-202ENST00000411463 HOXA7P31268 230 aaPredicted RBP28.01■■■□□ 2.07
R3HCC1-202ENST00000411463 SIAH1Q8IUQ4 282 aa28.01■■■□□ 2.07
R3HCC1-202ENST00000411463 CD99L2Q8TCZ2 262 aa28.01■■■□□ 2.07
R3HCC1-202ENST00000411463 ARHGEF10LQ9HCE6 1279 aa28.01■■■□□ 2.07
R3HCC1-202ENST00000411463 ANAPC4Q9UJX5 808 aa28.01■■■□□ 2.07
R3HCC1-202ENST00000411463 ZMYM6O95789 1325 aa28.01■■■□□ 2.07
R3HCC1-202ENST00000411463 CHMLP26374 656 aa28■■■□□ 2.07
R3HCC1-202ENST00000411463 CTDSPL2Q05D32 466 aa28■■■□□ 2.07
R3HCC1-202ENST00000411463 GNL3Q9BVP2 549 aaKnown RBP eCLIP28■■■□□ 2.07
R3HCC1-202ENST00000411463 MCOLN1Q9GZU1 580 aa28■■■□□ 2.07
R3HCC1-202ENST00000411463 ASCC2Q9H1I8 757 aaPredicted RBP28■■■□□ 2.07
R3HCC1-202ENST00000411463 LOC285556D6RIA3 1793 aa28■■■□□ 2.07
R3HCC1-202ENST00000411463 RUFY2Q8WXA3 655 aa27.99■■■□□ 2.07
R3HCC1-202ENST00000411463 SH2D4AQ9H788 454 aa27.99■■■□□ 2.07
R3HCC1-202ENST00000411463 IRX3P78415 501 aaPredicted RBP27.98■■■□□ 2.07
R3HCC1-202ENST00000411463 TMX2Q9Y320 296 aa27.98■■■□□ 2.07
R3HCC1-202ENST00000411463 BCRP11274 1271 aa27.97■■■□□ 2.07
R3HCC1-202ENST00000411463 EEF2P13639 858 aaKnown RBP27.97■■■□□ 2.07
R3HCC1-202ENST00000411463 LACTBP83111 547 aaPredicted RBP27.97■■■□□ 2.07
R3HCC1-202ENST00000411463 ATP2B2Q01814 1243 aa27.97■■■□□ 2.07
R3HCC1-202ENST00000411463 IL25Q9H293 177 aa27.97■■■□□ 2.07
R3HCC1-202ENST00000411463 PPP4R2Q9NY27 417 aa27.97■■■□□ 2.07
R3HCC1-202ENST00000411463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.97■■■□□ 2.07
R3HCC1-202ENST00000411463 RAD50Q92878 1312 aa27.96■■■□□ 2.07
R3HCC1-202ENST00000411463 VCAM1P19320 739 aa27.96■■■□□ 2.07
R3HCC1-202ENST00000411463 KIF22Q14807 665 aa27.96■■■□□ 2.07
R3HCC1-202ENST00000411463 ARHGEF6Q15052 776 aa27.96■■■□□ 2.07
R3HCC1-202ENST00000411463 PKN2Q16513 984 aaKnown RBP27.96■■■□□ 2.07
R3HCC1-202ENST00000411463 DSCC1Q9BVC3 393 aa27.96■■■□□ 2.07
R3HCC1-202ENST00000411463 TRIM17Q9Y577 477 aa27.96■■■□□ 2.07
R3HCC1-202ENST00000411463 TSPY3P0CV98 308 aa27.95■■■□□ 2.07
R3HCC1-202ENST00000411463 TSPY8P0CW00 308 aa27.95■■■□□ 2.07
R3HCC1-202ENST00000411463 EFCC1Q9HA90 598 aa27.95■■■□□ 2.07
R3HCC1-202ENST00000411463 INCENPQ9NQS7 918 aa27.95■■■□□ 2.07
R3HCC1-202ENST00000411463 MYH8P13535 1937 aa27.95■■■□□ 2.07
R3HCC1-202ENST00000411463 USP17L15C9J2P7 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L13C9JLJ4 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L11C9JVI0 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L18D6R9N7 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L22D6RA61 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L17D6RBQ6 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L19D6RCP7 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L20D6RJB6 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 GCLCP48506 637 aaPredicted RBP27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 CAP1Q01518 475 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 TFAP4Q01664 338 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 USP17L24Q0WX57 530 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 BMP2KLQ5H9B9 411 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 FAM47AQ5JRC9 791 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 OTOP1Q7RTM1 612 aa27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 P2RX7Q99572 595 aaKnown RBP27.95■■■□□ 2.06
R3HCC1-202ENST00000411463 IGKV6D-41A0A0C4DH26 115 aa27.94■■■□□ 2.06
R3HCC1-202ENST00000411463 FGRP09769 529 aa27.94■■■□□ 2.06
R3HCC1-202ENST00000411463 HAND2P61296 217 aa27.94■■■□□ 2.06
R3HCC1-202ENST00000411463 ANKRD13CQ8N6S4 541 aa27.94■■■□□ 2.06
R3HCC1-202ENST00000411463 NEDD1Q8NHV4 660 aa27.94■■■□□ 2.06
R3HCC1-202ENST00000411463 NYAP2Q9P242 653 aa27.94■■■□□ 2.06
R3HCC1-202ENST00000411463 TACC3Q9Y6A5 838 aa27.94■■■□□ 2.06
R3HCC1-202ENST00000411463 LPAR1Q92633 364 aa27.93■■■□□ 2.06
R3HCC1-202ENST00000411463 ARHGAP39Q9C0H5 1083 aa27.93■■■□□ 2.06
R3HCC1-202ENST00000411463 RPAP3Q9H6T3 665 aaPredicted RBP27.93■■■□□ 2.06
R3HCC1-202ENST00000411463 VCPKMTQ9H867 229 aa27.93■■■□□ 2.06
R3HCC1-202ENST00000411463 ZNF213O14771 459 aa27.92■■■□□ 2.06
R3HCC1-202ENST00000411463 ORC4O43929 436 aa27.92■■■□□ 2.06
R3HCC1-202ENST00000411463 HERVK_113P62684 666 aa27.92■■■□□ 2.06
R3HCC1-202ENST00000411463 CATSPERGQ6ZRH7 1159 aa27.92■■■□□ 2.06
R3HCC1-202ENST00000411463 CEP95Q96GE4 821 aa27.92■■■□□ 2.06
R3HCC1-202ENST00000411463 MTMR4Q9NYA4 1195 aa27.92■■■□□ 2.06
R3HCC1-202ENST00000411463 CTNNA3Q9UI47 895 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms