RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FBXO33Q7Z6M2 555 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SLC16A11Q8NCK7 471 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 RNF214Q8ND24 703 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZFYVE28Q9HCC9 887 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 EIF1AYO14602 144 aaKnown RBP4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GPR182O15218 404 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 HPXP02790 462 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 XRCC5P13010 732 aaKnown RBP4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZNF157P51786 506 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 VMACQ2NL98 169 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 HHIPL2Q6UWX4 724 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TMC4Q7Z404 712 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 IRF2BP1Q8IU81 584 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SLC6A17Q9H1V8 727 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 METTL5Q9NRN9 209 aaKnown RBP4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 FAM8A1Q9UBU6 413 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TMEM59LQ9UK28 342 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PALD1Q9ULE6 856 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 MAPK8IP1Q9UQF2 711 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 CUX2O14529 1486 aa4.11□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SCAMP3O14828 347 aaKnown RBP4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GADD45BO75293 160 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GSTP1P09211 210 aaKnown RBP4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 RLBP1P12271 317 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TCF3P15923 654 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TNFRSF1AP19438 455 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 HMGA2P52926 109 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 DAB2P98082 770 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GNL2Q13823 731 aaKnown RBP4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SP8Q8IXZ3 490 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 MFSD4AQ8N468 514 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 KCNB2Q92953 911 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 UBE2FQ969M7 185 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SORCS2Q96PQ0 1159 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 MENTQ9BUN1 341 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 C19orf44Q9H6X5 657 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 KRT82Q9NSB4 513 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZSWIM5Q9P217 1185 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 DCAF1Q9Y4B6 1507 aa4.1□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZC3H12DA2A288 527 aaKnown RBP4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SLC22A31A6NKX4 558 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GSTT1P30711 240 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PDE6BP35913 854 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ERVK-24P63145 666 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PWP1Q13610 501 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TSNAXIP1Q2TAA8 658 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 DACT3Q96B18 629 aaPredicted RBP4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 DUSP9Q99956 384 aaKnown RBP4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ADAMTS10Q9H324 1103 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZNF552Q9H707 407 aaPredicted RBP4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 C12orf49Q9H741 205 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PARP2Q9UGN5 583 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 IRAK3Q9Y616 596 aa4.09□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ITPKAP23677 461 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ZC3H12AQ5D1E8 599 aaKnown RBP4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 GALNT12Q8IXK2 581 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 TMEM87AQ8NBN3 555 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CCDC74AQ96AQ1 378 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SIGLEC10Q96LC7 697 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 EHD4Q9H223 541 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PPM1HQ9ULR3 514 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 TPX2Q9ULW0 747 aaKnown RBP4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SAMM50Q9Y512 469 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ST14Q9Y5Y6 855 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 AK5Q9Y6K8 562 aa4.08□□□□□ -1.76
RNU6-1140P-201ENST00000410517 BICRAQ9NZM4 1560 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 LMNB1P20700 586 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ST13P50502 369 aaKnown RBP4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ORC1Q13415 861 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SF3A1Q15459 793 aaKnown RBP4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SFRP5Q5T4F7 317 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 HS2ST1Q7LGA3 356 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 FRMD5Q7Z6J6 570 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 UBE3DQ7Z6J8 389 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 THAP5Q7Z6K1 395 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 RNF34Q969K3 372 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 INTS4Q96HW7 963 aaKnown RBP4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CEP44Q9C0F1 390 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 NPHS2Q9NP85 383 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PICK1Q9NRD5 415 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CSADQ9Y600 493 aa4.07□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CC2D2AQ9P2K1 1620 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 K7ESM1 405 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ZNF76P36508 570 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ZC3H6P61129 1189 aaKnown RBP4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PTPN12Q05209 780 aaKnown RBP4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 RTP5Q14D33 572 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ZNF827Q17R98 1081 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PPM1JQ5JR12 505 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 KIAA0319Q5VV43 1072 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 WDR26Q9H7D7 661 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CCSER2Q9H7U1 834 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CAPN6Q9Y6Q1 641 aa4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 EIF4G1Q04637 1599 aaKnown RBP4.06□□□□□ -1.76
RNU6-1140P-201ENST00000410517 MATN3O15232 486 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PRICKLE3O43900 615 aaPredicted RBP4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CBX7O95931 251 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PPP2R3AQ06190 1150 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 FAAP100Q0VG06 881 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 MRPL58Q14197 206 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms